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• Joint probabilistic-logical refinement of multiple protein feature predictors.

  Teso S, Passerini A. Teso S, et al. BMC Bioinformatics. 2014 Jan 15;15:16. doi: 10.1186/1471-2105-15-16. BMC Bioinformatics. 2014. PMID: 24428894 Free PMC article.
• A comparison of parallel pyrosequencing and sanger clone-based sequencing and its impact on the characterization of the genetic diversity of HIV-1.

  Liang B, Luo M, Scott-Herridge J, Semeniuk C, Mendoza M, Capina R, Sheardown B, Ji H, Kimani J, Ball BT, Van Domselaar G, Graham M, Tyler S, Jones SJ, Plummer FA. Liang B, et al. PLoS One. 2011;6(10):e26745. doi: 10.1371/journal.pone.0026745. Epub 2011 Oct 21. PLoS One. 2011. PMID: 22039546 Free PMC article.
• Emergence of Antifungal Resistant Subclades in the Global Predominant Phylogenetic Population of Candida albicans.

  Gong J, Chen XF, Fan X, Xu J, Zhang H, Li RY, Chen SC, Kong F, Zhang S, Sun ZY, Kang M, Liao K, Guo DW, Wan Z, Hu ZD, Chu YZ, Zhao HM, Zou GL, Shen C, Geng YY, Wu WW, Wang H, Zhao F, Lu X, He LH, Liu GM, Xu YC, Zhang JZ, Xiao M. Gong J, et al. Microbiol Spectr. 2023 Feb 14;11(1):e0380722. doi: 10.1128/spectrum.03807-22. Epub 2023 Jan 26. Microbiol Spectr. 2023. PMID: 36700687 Free PMC article.
• A structural model of latent evolutionary potentials underlying neutral networks in proteins.

  Wroe R, Chan HS, Bornberg-Bauer E. Wroe R, et al. HFSP J. 2007 May;1(1):79-87. doi: 10.2976/1.2739116/10.2976/1. Epub 2007 May 21. HFSP J. 2007. PMID: 19404462 Free PMC article.
• Comparative transcriptomic analysis of Tibetan Gynaephora to explore the genetic basis of insect adaptation to divergent altitude environments.

  Zhang QL, Zhang L, Yang XZ, Wang XT, Li XP, Wang J, Chen JY, Yuan ML. Zhang QL, et al. Sci Rep. 2017 Dec 5;7(1):16972. doi: 10.1038/s41598-017-17051-4. Sci Rep. 2017. PMID: 29208990 Free PMC article.