Entry - #615768 - SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 16; SCAR16 - OMIM
# 615768

SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 16; SCAR16


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
16p13.3 Spinocerebellar ataxia, autosomal recessive 16 615768 AR 3 STUB1 607207
Clinical Synopsis
 
Phenotypic Series
 
A quick reference overview and guide (PDF)">

INHERITANCE
- Autosomal recessive
HEAD & NECK
Eyes
- Nystagmus (in some patients)
- External ophthalmoplegia (in some patients)
- Saccadic pursuit
GENITOURINARY
Bladder
- Urinary urgency (in some patients)
- Urinary incontinence (in some patients)
NEUROLOGIC
Central Nervous System
- Spinocerebellar ataxia
- Truncal ataxia
- Limb ataxia
- Gait instability
- Dysarthria
- Spasticity (in some patients)
- Hyperreflexia (in some patients)
- Ankle clonus (in some patients)
- Tremor (in some patients)
- Dystonia
- Cognitive impairment, mild (in some patients)
- Cerebellar atrophy
- Cerebellar hypoplasia
Peripheral Nervous System
- Sensory axonal neuropathy, distal, mild
- Hyporeflexia
ENDOCRINE FEATURES
- Hypogonadotropic hypogonadism (in some females)
- Lack of secondary sexual characteristics (in 1 family)
MISCELLANEOUS
- Variable age at onset (range 2 to 48 years)
- Onset usually in second decade
- Progressive disorder
MOLECULAR BASIS
- Caused by mutation in the STIP1 homologous and U box-containing protein 1 gene (STUB1, 607207.0001)
Spinocerebellar ataxia, autosomal recessive - PS213200 - 32 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.22-p36.21 Spinocerebellar ataxia, autosomal recessive 4 AR 3 607317 VPS13D 608877
1p36.11 Lichtenstein-Knorr syndrome AR 3 616291 SLC9A1 107310
1p12 Spinocerebellar ataxia, autosomal recessive 27 AR 3 618369 GDAP2 618128
1q32.2 ?Spinocerebellar ataxia, autosomal recessive 11 AR 3 614229 SYT14 610949
1q42.13 Coenzyme Q10 deficiency, primary, 4 AR 3 612016 COQ8 606980
2q11.2 ?Spinocerebellar ataxia, autosomal recessive 22 AR 3 616948 VWA3B 614884
3p25.3 Spinocerebellar ataxia, autosomal recessive 31 AR 3 619422 ATG7 608760
3p22.1-p21.33 Spinocerebellar ataxia, autosomal recessive 10 AR 3 613728 ANO10 613726
3q22.1 ?Spinocerebellar ataxia, autosomal recessive 24 AR 3 617133 UBA5 610552
3q29 Spinocerebellar ataxia, autosomal recessive 15 AR 3 615705 RUBCN 613516
4q22.1-q22.2 Spinocerebellar ataxia, autosomal recessive 18 AR 3 616204 GRID2 602368
5q33.3 Spinocerebellar ataxia, autosomal recessive 28 AR 3 618800 THG1L 618802
6p23-p21 Spinocerebellar ataxia, autosomal recessive 3 AR 2 271250 SCAR3 271250
6p22.3 Spinocerebellar ataxia, autosomal recessive 23 AR 3 616949 TDP2 605764
6q14.3 Spinocerebellar ataxia, autosomal recessive 20 AR 3 616354 SNX14 616105
6q21 ?Spinocerebellar ataxia, autosomal recessive 25 AR 3 617584 ATG5 604261
6q24.3 Spinocerebellar ataxia, autosomal recessive 13 AR 3 614831 GRM1 604473
6q25.2 Spinocerebellar ataxia, autosomal recessive 8 AR 3 610743 SYNE1 608441
7p14.1 Spinocerebellar ataxia, autosomal recessive 29 AR 3 619389 VPS41 605485
8q12.1 Spinocerebellar ataxia, autosomal recessive 34 AR 3 613227 CA8 114815
9q34.3 Spinocerebellar ataxia, autosomal recessive 2 AR 3 213200 PMPCA 613036
10p15.2 Spinocerebellar ataxia, autosomal recessive 30 AR 3 619405 PITRM1 618211
10q24.31 Spinocerebellar ataxia, autosomal recessive 17 AR 3 616127 CWF19L1 616120
10q26.11 Spinocerebellar ataxia, autosomal recessive 32 AR 3 619862 PRDX3 604769
11p15.4 Spinocerebellar ataxia, autosomal recessive 7 AR 3 609270 TPP1 607998
11q13.1 Spinocerebellar ataxia, autosomal recessive 21 AR 3 616719 SCYL1 607982
11q13.2 Spinocerebellar ataxia, autosomal recessive 14 AR 3 615386 SPTBN2 604985
16p13.3 Spinocerebellar ataxia, autosomal recessive 16 AR 3 615768 STUB1 607207
16q23.1-q23.2 Spinocerebellar ataxia, autosomal recessive 12 AR 3 614322 WWOX 605131
19q13.31 ?Spinocerebellar ataxia, autosomal recessive 26 AR 3 617633 XRCC1 194360
20q11-q13 Spinocerebellar ataxia, autosomal recessive 6 AR 2 608029 SCAR6 608029
22q13.2 ?Spinocerebellar ataxia, autosomal recessive 33 AR 3 620208 RNU12 620204

TEXT

A number sign (#) is used with this entry because autosomal recessive spinocerebellar ataxia-16 (SCAR16) is caused by homozygous or compound heterozygous mutation in the STUB1 gene (607207) on chromosome 16p13.

Heterozygous mutation in the STUB1 gene causes an autosomal dominant complex neurodegenerative disorder, SCA48 (618093), which shows some overlapping features.


Description

Autosomal recessive spinocerebellar ataxia-16 (SCAR16) is a progressive neurologic disorder characterized by truncal and limb ataxia, resulting in gait instability, associated with cerebellar atrophy on brain imaging. Most patients have onset in the teenage years, although earlier and later onset have been reported. Additional features may include dysarthria, nystagmus, hyperreflexia of the lower limbs, and mild peripheral sensory neuropathy. Some patients have gonadal dysfunction or hypogonadism and/or cognitive deficits. The phenotype represents a spectrum or continuum of neurodegenerative features that may overlap with those of SCA48 (summary by Shi et al., 2013 and Ravel et al., 2021).


Clinical Features

Shi et al. (2013) reported a Chinese family in which 4 sibs developed progressive spinocerebellar ataxia between 14 and 19 years of age. All had dysarthria. Two patients had nystagmus, 2 had ophthalmoplegia, and 3 had increased tendon reflexes, including 2 with extensor plantar responses. Two patients developed mild cognitive impairment later in life. All had decreased position sense, and electrophysiologic studies showed subtle impairments in the peripheral nerves. Brain MRI of 3 patients showed severe cerebellar atrophy. Laboratory studies of all patients showed normal hormone levels, excluding hypogonadism. Two additional unrelated patients with a similar disorder were also reported. One had hyperreflexia.

Shi et al. (2014) reported 2 Chinese sisters with onset of spinocerebellar ataxia in the late teenage years and hypogonadotropic hypogonadism. Features of cerebellar ataxia included nystagmus, dysarthria, and gait disturbance. One sister developed hand and head tremor and showed hyperreflexia, suggestive of pyramidal tract involvement. Detailed cognitive testing suggested a mild defect in both patients. Brain MRI showed cerebellar atrophy. Both young women had poor sexual development and lack of menses in their early twenties. Laboratory studies showed decreased estradiol and progesterone as well as decreased follicle-stimulating hormone (FSH; see 136530) and luteinizing hormone (LH; see 152780), consistent with a pituitary or hypothalamic defect. Shi et al. (2014) noted that the phenotype in these sisters was consistent with a clinical diagnosis of Gordon Holmes syndrome (GDHS; 212840).

Synofzik et al. (2014) reported 4 Caucasian patients from 3 families with SCAR16. The families were from Germany, western Turkey, and Saudi Arabia, respectively. The age at onset of ataxia was highly variable, ranging from 2 to 48 years. All 4 patients also had evidence of pyramidal tract damage. Two had only electrophysiologic evidence, whereas 2 brothers showed clinical spasticity with hyperreflexia of the lower limbs. One patient had myoclonic jerks in the face and left arm; another had mildly reduced vibration sense in the legs, consistent with a sensory axonal neuropathy. None of the patients had evidence of gonadal dysfunction or cognitive impairment, although 1 had concentration difficulties. Brain MRI showed marked cerebellar atrophy in all patients.

Depondt et al. (2014) reported 2 Belgian brothers, born of unrelated parents, with spinocerebellar ataxia. They presented with progressive ataxia in their mid-twenties and cognitive deterioration in the following years. Features included gait instability, dysarthria, brisk tendon reflexes, and cerebellar atrophy on brain imaging. Cognitive testing indicated mental slowing, verbal and visuospatial memory deficits, executive dysfunction, and IQ in the 70s. Endocrine studies were normal. Whole-exome sequencing identified compound heterozygosity for 2 mutations in the STUB1 gene (607207.0013 and 607207.0015), confirming the diagnosis of SCAR16. No other family members were affected.

Heimdal et al. (2014) reported 3 sibs, born of consanguineous parents of Arab descent, with SCAR16. Two boys and their sister presented in early life (birth to 2 years) with impaired motor development and gait difficulties. The patients developed progressive cerebellar ataxia as well as variable additional neurologic features, including cognitive regression, dysarthria, dyspraxia, intermittent tremor, and increased muscle tone. Brain MRI showed cerebellar hypoplasia, thin pons, and thin corpus callosum. Puberty and sexual development were unremarkable, although the girl had slightly late menarche at age 15 years compared to other females in the family. All had an aged appearance as young adults, and 2 had slight presbycusis. Additional findings in this family included diabetes mellitus, alopecia, uveitis, and ulcerative colitis; it was unclear whether these features were related to SCAR16. An unrelated woman from Sri Lanka had a milder form of the disorder: she presented at age 25 years with oligomenorrhea and secondary infertility, developing gait ataxia and dysarthria in her thirties. Brain MRI showed cerebellar hypoplasia and 'empty sella,' consistent with pituitary dysfunction. Heimdal et al. (2014) concluded that mild to moderate cognitive impairment is common in this disorder, although hypogonadotropic hypogonadism is not an obligatory feature.

Ravel et al. (2021) reported 4 patients from 2 unrelated French families (families 1 and 2) with SCAR16. The mean age at symptom onset was 30 years (range 14 to 45), and the patients presented with features of a cerebellar syndrome, including slowly progressive gait ataxia or dysarthria. Variable additional features included eye movement abnormalities, such as nystagmus or saccadic pursuit, tremor, dystonia, dysphagia, urinary incontinence, hyperreflexia, and extensor plantar responses. All patients had cerebellar atrophy on brain imaging. One patient in family 1 had an unusually severe phenotype with symptom onset at age 14. She had profound hypotonia, amyotrophy, generalized dystonia, dyskinetic movements, joint contractures, limb areflexia, severely impaired intellectual development with no verbal communication, and behavioral and psychiatric features, including depression, aggression, and mutism. Her sister, who had a more typical disease course, had word-finding difficulties, suggesting that cognitive dysfunction may occur in SCAR16.


Inheritance

The transmission pattern of SCAR16 in the families reported by Shi et al. (2014) and Synofzik et al. (2014) and in family 1 reported by Shi et al. (2013) was consistent with autosomal recessive inheritance.


Molecular Genetics

In affected members of 3 unrelated Chinese families with SCAR16, Shi et al. (2013) identified homozygous or compound heterozygous mutations in the STUB1 gene (see, e.g., 607207.0001-607207.0003). The mutation in the first family was found by linkage analysis and whole-exome sequencing. The 2 additional families were ascertained by direct sequencing of the STUB1 gene in a larger cohort of 36 families with spinocerebellar ataxia and 196 patients with sporadic disease in whom mutations in common ataxia genes had been excluded. In vitro functional expression studies in HEK293 cells showed that none of the mutations identified by Shi et al. (2014) effectively promoted the degradation of GRIN2A (138253), indicating a loss of ubiquitinase activity. Shi et al. (2014) hypothesized that the inability to degrade NMDA receptors in neurons may contribute to the pathogenesis of ataxia.

In 2 Chinese sisters with SCAR16 and hypogonadotropic hypogonadism, Shi et al. (2014) identified a homozygous missense mutation in the STUB1 gene (T246M; 607207.0004). The mutation was found by whole-exome sequencing and homozygosity mapping. In vitro functional expression studies showed that the mutation caused a loss of ubiquitin ligase activity, but chaperone function was not disturbed. Shi et al. (2014) concluded that the disorder resulted from loss of STUB1 function.

In 3 (1.8%) of 167 patients with autosomal recessive cerebellar ataxia, Synofzik et al. (2014) identified 4 novel homozygous or compound heterozygous missense mutations in the STUB1 gene (607207.0005-607207.0008). One of the mutations affected the ubiquitin ligase domain, whereas the others affected the TPR (tetratricopeptide repeat) domain. No STUB1 mutations were found in 133 patients with spastic paraplegia.

In 3 sibs, born of consanguineous parents of Arab descent, with SCAR16, Heimdal et al. (2014) identified a homozygous missense mutation in the STUB1 gene (N65S; 607207.0009). In vitro functional expression studies showed that N65S-mutant STUB1 had significantly impaired ability to ubiquitinate HSC70 (HSPA8; 600816) compared to wildtype, most likely due to low substrate affinity. The findings were consistent with a loss of function. An unrelated woman with onset of cerebellar ataxia and hypogonadotropic hypogonadism as a young adult was found to be compound heterozygous for a nonsense and a missense mutation in the STUB1 gene.

In 2 Belgian sibs with SCAR16, Depondt et al. (2014) identified compound heterozygous mutations in the STUB1 gene (607207.0013 and 607207.0015). Functional studies of the variants and studies of patient cells were not performed.

In 4 patients from 2 unrelated French families (families 1 and 2) with SCAR16, Ravel et al. (2021) identified compound heterozygous mutations in the STUB1 gene. There were 3 missense variants and an in-frame deletion. The mutations were found by targeted next-generation sequencing. The mutations occurred throughout the gene and often affected functional domains; functional studies of the variants and studies of patient cells were not performed.


Animal Model

Shi et al. (2014) found that Stub1-null mice had severe motor impairment due to cerebellar dysfunction. They also showed mild defects in learning and memory, suggesting hippocampal compromise. Neuropathologic examination showed loss of Purkinje cells in the cerebellum of mutant mice. In addition, mutant mice showed evidence of gonadal dysfunction, with decreased testicular weight and decreased levels of FSH.


REFERENCES

  1. Depondt, C., Donatello, S., Simonis, N., Rai, M., van Heurck, R., Abramowicz, M., D'Hooghe, M., Pandolfo, M. Autosomal recessive cerebellar ataxia of adult onset due to STUB1 mutations. Neurology 82: 1749-1750, 2014. [PubMed: 24719489, related citations] [Full Text]

  2. Heimdal, K., Sanchez-Guixe, M., Aukrust, I., Bollerslev, J., Bruland, O., Jablonski, G. E., Erichsen, A. K., Gude, E., Koht, J. A., Erdal, S., Fiskerstrand, T., Haukanes, B. I., Boman, H., Bjorkhaug, L., Tallaksen, C. M. E., Knappskog, P. M., Johansson, S. STUB1 mutations in autosomal recessive ataxias--evidence for mutation-specific clinical heterogeneity. Orphanet J. Rare Dis. 9: 146, 2014. Note: Electronic Article. [PubMed: 25258038, images, related citations] [Full Text]

  3. Ravel, J. M., Benkirane, M., Calmels, N., Marelli, C., Ory-Magne, F., Ewenczyk, C., Halleb, Y., Tison, F., Lecocq, C., Pische, G., Casenave, P., Chaussenot, A., and 16 others. Expanding the clinical spectrum of STIP1 homology and U-box containing protein 1-associated ataxia. J. Neurol. 268: 1927-1937, 2021. [PubMed: 33417001, related citations] [Full Text]

  4. Shi, C.-H., Schisler, J. C., Rubel, C. E., Tan, S., Song, B., McDonough, H., Xu, L., Portbury, A. L., Mao, C.-Y., True, C., Wang, R.-H., Wang, Q.-Z., Sun, S.-L., Seminara, S. B., Patterson, C., Xu, Y.-M. Ataxia and hypogonadism caused by the loss of ubiquitin ligase activity of the U box protein CHIP. Hum. Molec. Genet. 23: 1013-1024, 2014. [PubMed: 24113144, images, related citations] [Full Text]

  5. Shi, Y., Wang, J., Li, J.-D., Ren, H., Guan, W., He, M., Yan, W., Zhou, Y., Hu, Z., Zhang, J., Xiao, J., Su, Z., and 16 others. Identification of CHIP as a novel causative gene for autosomal recessive cerebellar ataxia. PLoS One 8: e81884, 2013. Note: Electronic Article. [PubMed: 24312598, images, related citations] [Full Text]

  6. Synofzik, M., Schule, R., Schulze, M., Gburek-Augustat, J., Schweizer, R., Schirmacher, A., Krageloh-Mann, I., Gonzalez, M., Young, P., Zuchner, S., Schols, L., Bauer, P. Phenotype and frequency of STUB1 mutations: next-generation screenings in Caucasian ataxia and spastic paraplegia cohorts. Orphanet J. Rare Dis. 9: 57, 2014. Note: Electronic Article. [PubMed: 24742043, images, related citations] [Full Text]


Cassandra L. Kniffin - updated : 02/09/2021
Cassandra L. Kniffin - updated : 12/18/2014
Cassandra L. Kniffin - updated : 6/26/2014
Creation Date:
Cassandra L. Kniffin : 4/28/2014
carol : 06/24/2021
alopez : 05/25/2021
carol : 02/25/2021
alopez : 02/23/2021
ckniffin : 02/09/2021
carol : 05/08/2017
alopez : 12/22/2014
mcolton : 12/19/2014
ckniffin : 12/18/2014
alopez : 7/1/2014
ckniffin : 6/26/2014
alopez : 4/29/2014
mcolton : 4/29/2014
ckniffin : 4/29/2014

# 615768

SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 16; SCAR16


SNOMEDCT: 782719004;   ORPHA: 412057;   DO: 0080029;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
16p13.3 Spinocerebellar ataxia, autosomal recessive 16 615768 Autosomal recessive 3 STUB1 607207

TEXT

A number sign (#) is used with this entry because autosomal recessive spinocerebellar ataxia-16 (SCAR16) is caused by homozygous or compound heterozygous mutation in the STUB1 gene (607207) on chromosome 16p13.

Heterozygous mutation in the STUB1 gene causes an autosomal dominant complex neurodegenerative disorder, SCA48 (618093), which shows some overlapping features.


Description

Autosomal recessive spinocerebellar ataxia-16 (SCAR16) is a progressive neurologic disorder characterized by truncal and limb ataxia, resulting in gait instability, associated with cerebellar atrophy on brain imaging. Most patients have onset in the teenage years, although earlier and later onset have been reported. Additional features may include dysarthria, nystagmus, hyperreflexia of the lower limbs, and mild peripheral sensory neuropathy. Some patients have gonadal dysfunction or hypogonadism and/or cognitive deficits. The phenotype represents a spectrum or continuum of neurodegenerative features that may overlap with those of SCA48 (summary by Shi et al., 2013 and Ravel et al., 2021).


Clinical Features

Shi et al. (2013) reported a Chinese family in which 4 sibs developed progressive spinocerebellar ataxia between 14 and 19 years of age. All had dysarthria. Two patients had nystagmus, 2 had ophthalmoplegia, and 3 had increased tendon reflexes, including 2 with extensor plantar responses. Two patients developed mild cognitive impairment later in life. All had decreased position sense, and electrophysiologic studies showed subtle impairments in the peripheral nerves. Brain MRI of 3 patients showed severe cerebellar atrophy. Laboratory studies of all patients showed normal hormone levels, excluding hypogonadism. Two additional unrelated patients with a similar disorder were also reported. One had hyperreflexia.

Shi et al. (2014) reported 2 Chinese sisters with onset of spinocerebellar ataxia in the late teenage years and hypogonadotropic hypogonadism. Features of cerebellar ataxia included nystagmus, dysarthria, and gait disturbance. One sister developed hand and head tremor and showed hyperreflexia, suggestive of pyramidal tract involvement. Detailed cognitive testing suggested a mild defect in both patients. Brain MRI showed cerebellar atrophy. Both young women had poor sexual development and lack of menses in their early twenties. Laboratory studies showed decreased estradiol and progesterone as well as decreased follicle-stimulating hormone (FSH; see 136530) and luteinizing hormone (LH; see 152780), consistent with a pituitary or hypothalamic defect. Shi et al. (2014) noted that the phenotype in these sisters was consistent with a clinical diagnosis of Gordon Holmes syndrome (GDHS; 212840).

Synofzik et al. (2014) reported 4 Caucasian patients from 3 families with SCAR16. The families were from Germany, western Turkey, and Saudi Arabia, respectively. The age at onset of ataxia was highly variable, ranging from 2 to 48 years. All 4 patients also had evidence of pyramidal tract damage. Two had only electrophysiologic evidence, whereas 2 brothers showed clinical spasticity with hyperreflexia of the lower limbs. One patient had myoclonic jerks in the face and left arm; another had mildly reduced vibration sense in the legs, consistent with a sensory axonal neuropathy. None of the patients had evidence of gonadal dysfunction or cognitive impairment, although 1 had concentration difficulties. Brain MRI showed marked cerebellar atrophy in all patients.

Depondt et al. (2014) reported 2 Belgian brothers, born of unrelated parents, with spinocerebellar ataxia. They presented with progressive ataxia in their mid-twenties and cognitive deterioration in the following years. Features included gait instability, dysarthria, brisk tendon reflexes, and cerebellar atrophy on brain imaging. Cognitive testing indicated mental slowing, verbal and visuospatial memory deficits, executive dysfunction, and IQ in the 70s. Endocrine studies were normal. Whole-exome sequencing identified compound heterozygosity for 2 mutations in the STUB1 gene (607207.0013 and 607207.0015), confirming the diagnosis of SCAR16. No other family members were affected.

Heimdal et al. (2014) reported 3 sibs, born of consanguineous parents of Arab descent, with SCAR16. Two boys and their sister presented in early life (birth to 2 years) with impaired motor development and gait difficulties. The patients developed progressive cerebellar ataxia as well as variable additional neurologic features, including cognitive regression, dysarthria, dyspraxia, intermittent tremor, and increased muscle tone. Brain MRI showed cerebellar hypoplasia, thin pons, and thin corpus callosum. Puberty and sexual development were unremarkable, although the girl had slightly late menarche at age 15 years compared to other females in the family. All had an aged appearance as young adults, and 2 had slight presbycusis. Additional findings in this family included diabetes mellitus, alopecia, uveitis, and ulcerative colitis; it was unclear whether these features were related to SCAR16. An unrelated woman from Sri Lanka had a milder form of the disorder: she presented at age 25 years with oligomenorrhea and secondary infertility, developing gait ataxia and dysarthria in her thirties. Brain MRI showed cerebellar hypoplasia and 'empty sella,' consistent with pituitary dysfunction. Heimdal et al. (2014) concluded that mild to moderate cognitive impairment is common in this disorder, although hypogonadotropic hypogonadism is not an obligatory feature.

Ravel et al. (2021) reported 4 patients from 2 unrelated French families (families 1 and 2) with SCAR16. The mean age at symptom onset was 30 years (range 14 to 45), and the patients presented with features of a cerebellar syndrome, including slowly progressive gait ataxia or dysarthria. Variable additional features included eye movement abnormalities, such as nystagmus or saccadic pursuit, tremor, dystonia, dysphagia, urinary incontinence, hyperreflexia, and extensor plantar responses. All patients had cerebellar atrophy on brain imaging. One patient in family 1 had an unusually severe phenotype with symptom onset at age 14. She had profound hypotonia, amyotrophy, generalized dystonia, dyskinetic movements, joint contractures, limb areflexia, severely impaired intellectual development with no verbal communication, and behavioral and psychiatric features, including depression, aggression, and mutism. Her sister, who had a more typical disease course, had word-finding difficulties, suggesting that cognitive dysfunction may occur in SCAR16.


Inheritance

The transmission pattern of SCAR16 in the families reported by Shi et al. (2014) and Synofzik et al. (2014) and in family 1 reported by Shi et al. (2013) was consistent with autosomal recessive inheritance.


Molecular Genetics

In affected members of 3 unrelated Chinese families with SCAR16, Shi et al. (2013) identified homozygous or compound heterozygous mutations in the STUB1 gene (see, e.g., 607207.0001-607207.0003). The mutation in the first family was found by linkage analysis and whole-exome sequencing. The 2 additional families were ascertained by direct sequencing of the STUB1 gene in a larger cohort of 36 families with spinocerebellar ataxia and 196 patients with sporadic disease in whom mutations in common ataxia genes had been excluded. In vitro functional expression studies in HEK293 cells showed that none of the mutations identified by Shi et al. (2014) effectively promoted the degradation of GRIN2A (138253), indicating a loss of ubiquitinase activity. Shi et al. (2014) hypothesized that the inability to degrade NMDA receptors in neurons may contribute to the pathogenesis of ataxia.

In 2 Chinese sisters with SCAR16 and hypogonadotropic hypogonadism, Shi et al. (2014) identified a homozygous missense mutation in the STUB1 gene (T246M; 607207.0004). The mutation was found by whole-exome sequencing and homozygosity mapping. In vitro functional expression studies showed that the mutation caused a loss of ubiquitin ligase activity, but chaperone function was not disturbed. Shi et al. (2014) concluded that the disorder resulted from loss of STUB1 function.

In 3 (1.8%) of 167 patients with autosomal recessive cerebellar ataxia, Synofzik et al. (2014) identified 4 novel homozygous or compound heterozygous missense mutations in the STUB1 gene (607207.0005-607207.0008). One of the mutations affected the ubiquitin ligase domain, whereas the others affected the TPR (tetratricopeptide repeat) domain. No STUB1 mutations were found in 133 patients with spastic paraplegia.

In 3 sibs, born of consanguineous parents of Arab descent, with SCAR16, Heimdal et al. (2014) identified a homozygous missense mutation in the STUB1 gene (N65S; 607207.0009). In vitro functional expression studies showed that N65S-mutant STUB1 had significantly impaired ability to ubiquitinate HSC70 (HSPA8; 600816) compared to wildtype, most likely due to low substrate affinity. The findings were consistent with a loss of function. An unrelated woman with onset of cerebellar ataxia and hypogonadotropic hypogonadism as a young adult was found to be compound heterozygous for a nonsense and a missense mutation in the STUB1 gene.

In 2 Belgian sibs with SCAR16, Depondt et al. (2014) identified compound heterozygous mutations in the STUB1 gene (607207.0013 and 607207.0015). Functional studies of the variants and studies of patient cells were not performed.

In 4 patients from 2 unrelated French families (families 1 and 2) with SCAR16, Ravel et al. (2021) identified compound heterozygous mutations in the STUB1 gene. There were 3 missense variants and an in-frame deletion. The mutations were found by targeted next-generation sequencing. The mutations occurred throughout the gene and often affected functional domains; functional studies of the variants and studies of patient cells were not performed.


Animal Model

Shi et al. (2014) found that Stub1-null mice had severe motor impairment due to cerebellar dysfunction. They also showed mild defects in learning and memory, suggesting hippocampal compromise. Neuropathologic examination showed loss of Purkinje cells in the cerebellum of mutant mice. In addition, mutant mice showed evidence of gonadal dysfunction, with decreased testicular weight and decreased levels of FSH.


REFERENCES

  1. Depondt, C., Donatello, S., Simonis, N., Rai, M., van Heurck, R., Abramowicz, M., D'Hooghe, M., Pandolfo, M. Autosomal recessive cerebellar ataxia of adult onset due to STUB1 mutations. Neurology 82: 1749-1750, 2014. [PubMed: 24719489] [Full Text: https://doi.org/10.1212/WNL.0000000000000416]

  2. Heimdal, K., Sanchez-Guixe, M., Aukrust, I., Bollerslev, J., Bruland, O., Jablonski, G. E., Erichsen, A. K., Gude, E., Koht, J. A., Erdal, S., Fiskerstrand, T., Haukanes, B. I., Boman, H., Bjorkhaug, L., Tallaksen, C. M. E., Knappskog, P. M., Johansson, S. STUB1 mutations in autosomal recessive ataxias--evidence for mutation-specific clinical heterogeneity. Orphanet J. Rare Dis. 9: 146, 2014. Note: Electronic Article. [PubMed: 25258038] [Full Text: https://doi.org/10.1186/s13023-014-0146-0]

  3. Ravel, J. M., Benkirane, M., Calmels, N., Marelli, C., Ory-Magne, F., Ewenczyk, C., Halleb, Y., Tison, F., Lecocq, C., Pische, G., Casenave, P., Chaussenot, A., and 16 others. Expanding the clinical spectrum of STIP1 homology and U-box containing protein 1-associated ataxia. J. Neurol. 268: 1927-1937, 2021. [PubMed: 33417001] [Full Text: https://doi.org/10.1007/s00415-020-10348-x]

  4. Shi, C.-H., Schisler, J. C., Rubel, C. E., Tan, S., Song, B., McDonough, H., Xu, L., Portbury, A. L., Mao, C.-Y., True, C., Wang, R.-H., Wang, Q.-Z., Sun, S.-L., Seminara, S. B., Patterson, C., Xu, Y.-M. Ataxia and hypogonadism caused by the loss of ubiquitin ligase activity of the U box protein CHIP. Hum. Molec. Genet. 23: 1013-1024, 2014. [PubMed: 24113144] [Full Text: https://doi.org/10.1093/hmg/ddt497]

  5. Shi, Y., Wang, J., Li, J.-D., Ren, H., Guan, W., He, M., Yan, W., Zhou, Y., Hu, Z., Zhang, J., Xiao, J., Su, Z., and 16 others. Identification of CHIP as a novel causative gene for autosomal recessive cerebellar ataxia. PLoS One 8: e81884, 2013. Note: Electronic Article. [PubMed: 24312598] [Full Text: https://doi.org/10.1371/journal.pone.0081884]

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Contributors:
Cassandra L. Kniffin - updated : 02/09/2021
Cassandra L. Kniffin - updated : 12/18/2014
Cassandra L. Kniffin - updated : 6/26/2014

Creation Date:
Cassandra L. Kniffin : 4/28/2014

Edit History:
carol : 06/24/2021
alopez : 05/25/2021
carol : 02/25/2021
alopez : 02/23/2021
ckniffin : 02/09/2021
carol : 05/08/2017
alopez : 12/22/2014
mcolton : 12/19/2014
ckniffin : 12/18/2014
alopez : 7/1/2014
ckniffin : 6/26/2014
alopez : 4/29/2014
mcolton : 4/29/2014
ckniffin : 4/29/2014