Entry - #615705 - SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 15; SCAR15 - OMIM
# 615705

SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 15; SCAR15


Alternative titles; symbols

SALIH ATAXIA


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
3q29 Spinocerebellar ataxia, autosomal recessive 15 615705 AR 3 RUBCN 613516
Clinical Synopsis
 
Phenotypic Series
 
A quick reference overview and guide (PDF)">

INHERITANCE
- Autosomal recessive
HEAD & NECK
Eyes
- Nystagmus
- Saccadic pursuit
NEUROLOGIC
Central Nervous System
- Delayed motor development
- Impaired intellectual development, mild to moderate (in some patients)
- Epilepsy (in some patients)
- Spinocerebellar ataxia (upper and lower limb involvement)
- Unsteady gait
- Dysarthria
- Superior vermian atrophy seen on MRI (rare)
Peripheral Nervous System
- Hyporeflexia
- Hyperreflexia
- Cerebellar atrophy (1 patient)
MISCELLANEOUS
- Onset in early childhood
- Progressive disorder
MOLECULAR BASIS
- Caused by mutation in the RUN domain and cysteine-rich domain containing, Beclin 1-interacting protein gene (RUBCN, 613516.0001)
Spinocerebellar ataxia, autosomal recessive - PS213200 - 32 Entries
Location Phenotype Inheritance Phenotype
mapping key
Phenotype
MIM number
Gene/Locus Gene/Locus
MIM number
1p36.22-p36.21 Spinocerebellar ataxia, autosomal recessive 4 AR 3 607317 VPS13D 608877
1p36.11 Lichtenstein-Knorr syndrome AR 3 616291 SLC9A1 107310
1p12 Spinocerebellar ataxia, autosomal recessive 27 AR 3 618369 GDAP2 618128
1q32.2 ?Spinocerebellar ataxia, autosomal recessive 11 AR 3 614229 SYT14 610949
1q42.13 Coenzyme Q10 deficiency, primary, 4 AR 3 612016 COQ8 606980
2q11.2 ?Spinocerebellar ataxia, autosomal recessive 22 AR 3 616948 VWA3B 614884
3p25.3 Spinocerebellar ataxia, autosomal recessive 31 AR 3 619422 ATG7 608760
3p22.1-p21.33 Spinocerebellar ataxia, autosomal recessive 10 AR 3 613728 ANO10 613726
3q22.1 ?Spinocerebellar ataxia, autosomal recessive 24 AR 3 617133 UBA5 610552
3q29 Spinocerebellar ataxia, autosomal recessive 15 AR 3 615705 RUBCN 613516
4q22.1-q22.2 Spinocerebellar ataxia, autosomal recessive 18 AR 3 616204 GRID2 602368
5q33.3 Spinocerebellar ataxia, autosomal recessive 28 AR 3 618800 THG1L 618802
6p23-p21 Spinocerebellar ataxia, autosomal recessive 3 AR 2 271250 SCAR3 271250
6p22.3 Spinocerebellar ataxia, autosomal recessive 23 AR 3 616949 TDP2 605764
6q14.3 Spinocerebellar ataxia, autosomal recessive 20 AR 3 616354 SNX14 616105
6q21 ?Spinocerebellar ataxia, autosomal recessive 25 AR 3 617584 ATG5 604261
6q24.3 Spinocerebellar ataxia, autosomal recessive 13 AR 3 614831 GRM1 604473
6q25.2 Spinocerebellar ataxia, autosomal recessive 8 AR 3 610743 SYNE1 608441
7p14.1 Spinocerebellar ataxia, autosomal recessive 29 AR 3 619389 VPS41 605485
8q12.1 Spinocerebellar ataxia, autosomal recessive 34 AR 3 613227 CA8 114815
9q34.3 Spinocerebellar ataxia, autosomal recessive 2 AR 3 213200 PMPCA 613036
10p15.2 Spinocerebellar ataxia, autosomal recessive 30 AR 3 619405 PITRM1 618211
10q24.31 Spinocerebellar ataxia, autosomal recessive 17 AR 3 616127 CWF19L1 616120
10q26.11 Spinocerebellar ataxia, autosomal recessive 32 AR 3 619862 PRDX3 604769
11p15.4 Spinocerebellar ataxia, autosomal recessive 7 AR 3 609270 TPP1 607998
11q13.1 Spinocerebellar ataxia, autosomal recessive 21 AR 3 616719 SCYL1 607982
11q13.2 Spinocerebellar ataxia, autosomal recessive 14 AR 3 615386 SPTBN2 604985
16p13.3 Spinocerebellar ataxia, autosomal recessive 16 AR 3 615768 STUB1 607207
16q23.1-q23.2 Spinocerebellar ataxia, autosomal recessive 12 AR 3 614322 WWOX 605131
19q13.31 ?Spinocerebellar ataxia, autosomal recessive 26 AR 3 617633 XRCC1 194360
20q11-q13 Spinocerebellar ataxia, autosomal recessive 6 AR 2 608029 SCAR6 608029
22q13.2 ?Spinocerebellar ataxia, autosomal recessive 33 AR 3 620208 RNU12 620204

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive spinocerebellar ataxia-15 (SCAR15) is caused by homozygous mutation in the KIAA0226 gene (RUBCN; 613516) on chromosome 3q29.


Description

Autosomal recessive spinocerebellar ataxia-15 (SCAR15) is characterized by early-onset ataxia, cognitive impairment, dysarthria, and developmental delay. Variable features include seizures, nystagmus, and abnormal reflexes (Seidahmed et al., 2020).


Clinical Features

Assoum et al. (2010) reported a consanguineous Saudi Arabian family in which 3 sisters had onset of cerebellar ataxia in early childhood. All showed delayed motor development with delayed walking. Two sisters had a more severe form of the disorder, with an unsteady gait apparent since learning to walk, whereas the third developed unsteady gait around age 7 years. Other features included dysarthria, upper limb involvement, abnormal eye movements, and hyporeflexia. Two patients had increased reflexes in the lower limbs. At age 7 months the 2 sisters who were more severely affected developed epilepsy, which was responsive to treatment with no relapse in either girl since age 3 years; both subsequently showed moderate mental retardation. Brain MRI was normal in the 3 girls at ages 16, 9, and 8 years, respectively, but showed mild cerebellar atrophy and prominent folia in 1 patient at age 18 years, suggesting progression of the disorder. At ages 16 to 25 years, they had limited walking without aid, but were unable to run.

Seidahmed et al. (2020) reported 2 brothers, born of consanguineous Saudi parents, with SCAR15. The sibs (18DG0163) had previously been reported by Maddirevula et al. (2019). The 6.5-year-old proband, who was born at 33 weeks' gestation, sat at age 1 year. He and his 17-year-old brother had delayed walking and always walked with an unsteady gait. They also had delayed speech, which was dysarthric. Cognitive abilities were mildly impaired in the younger sib and borderline in his brother, who was enrolled in special education. The younger brother had no signs of ataxia in the upper or lower limbs. In the older brother, deep tendon reflexes were enhanced in the lower limbs. He had mild upper limb, lower limb, and gait ataxia on tandem walking. Brain auditory evoked response testing revealed increased hearing threshold bilaterally. MRI at age 16 years revealed minimal superior vermian atrophy.


Inheritance

The transmission pattern of spinocerebellar ataxia in the family reported by Assoum et al. (2010) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 3 sisters, born of consanguineous Saudi Arabian parents, with autosomal recessive spinocerebellar ataxia, Assoum et al. (2010) identified a homozygous mutation in the KIAA0226 gene (c.2624delC; 613516.0001). The mutation, which was found by homozygosity mapping and candidate gene sequencing, segregated with the disorder in the family. The mutation results in the loss of the highly conserved DAG binding-like motif. Heterozygous carriers were unaffected. No mutations in the KIAA0226 gene were found in 172 additional families with non-Friedreich (FRDA; 229300) ataxia. Assoum et al. (2013) found that transfection of mutant KIAA0226 in COS-1 and HeLa cells resulted in mislocalization of the mutant protein from the late endosome and lysosomes to diffuse cytosolic distribution. The findings suggested that the mutation results in a loss of proper protein function, and that the disorder may relate to defects in endolysosomal machinery.

In 2 brothers, born to first-cousin Saudi parents, with SCAR15, Seidahmed et al. (2020) identified homozygosity for the same c.2624delC mutation in the RUBCN gene that had been described by Assoum et al. (2013) in another Saudi family. The mutation, which was identified by whole-exome sequencing, segregated with the disease in the family. By autozygosity mapping focused on the smallest shared region of homozygosity and mutation age analysis, Seidahmed et al. (2020) showed that the mutation occurred approximately 1,550 years earlier, spanning about 62 generations.


REFERENCES

  1. Assoum, M., Salih, M. A., Drouot, N., H'Mida-Ben Brahim, D., Lagier-Tourenne, C., AlDrees, A., Elmalik, S. A., Ahmed, T. S., Seidahmed, M. Z., Kabiraj, M. M., Koenig, M. Rundataxin, a novel protein with RUN and diacylglycerol binding domains, is mutant in a new recessive ataxia. Brain 133: 2439-2447, 2010. [PubMed: 20826435, related citations] [Full Text]

  2. Assoum, M., Salih, M. A., Drouot, N., Hnia, K., Martelli, A., Koenig, M. The Salih ataxia mutation impairs Rubicon endosomal localization. Cerebellum 12: 835-840, 2013. [PubMed: 23728897, related citations] [Full Text]

  3. Maddirevula, S., Alzahrani, F., Al-Owain, M., Al Muhaizea, M. A., Kayyali, H. R., AlHashem, A., Rahbeeni, Z., Al-Otaibi, M., Alzaidan, H. I., Balobaid, A., El Khashab, H. Y., Bubshait, D. K., and 36 others. Autozygome and high throughput confirmation of disease genes candidacy. Genet. Med. 21: 736-742, 2019. [PubMed: 30237576, related citations] [Full Text]

  4. Seidahmed, M. Z., Hamad, M. H., AlBakheet, A., Elmalik, S. A., AlDrees, A., Al-Sufayan, J., Alorainy, I., Ghozzi, I. M., Colak, D., Salih, M. A., Kaya, N. Ancient founder mutation in RUBCN: a second unrelated family confirms Salih ataxia (SCAR15). BMC Neurol. 20: 207, 2020. [PubMed: 32450808, related citations] [Full Text]


Contributors:
Hilary J. Vernon - updated : 09/11/2020
Creation Date:
Cassandra L. Kniffin : 3/24/2014
carol : 10/08/2020
carol : 09/12/2020
carol : 09/11/2020
carol : 04/17/2019
carol : 03/24/2014
ckniffin : 3/24/2014

# 615705

SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 15; SCAR15


Alternative titles; symbols

SALIH ATAXIA


SNOMEDCT: 782721009;   ORPHA: 404499;   DO: 0080057;  


Phenotype-Gene Relationships

Location Phenotype Phenotype
MIM number
Inheritance Phenotype
mapping key
Gene/Locus Gene/Locus
MIM number
3q29 Spinocerebellar ataxia, autosomal recessive 15 615705 Autosomal recessive 3 RUBCN 613516

TEXT

A number sign (#) is used with this entry because of evidence that autosomal recessive spinocerebellar ataxia-15 (SCAR15) is caused by homozygous mutation in the KIAA0226 gene (RUBCN; 613516) on chromosome 3q29.


Description

Autosomal recessive spinocerebellar ataxia-15 (SCAR15) is characterized by early-onset ataxia, cognitive impairment, dysarthria, and developmental delay. Variable features include seizures, nystagmus, and abnormal reflexes (Seidahmed et al., 2020).


Clinical Features

Assoum et al. (2010) reported a consanguineous Saudi Arabian family in which 3 sisters had onset of cerebellar ataxia in early childhood. All showed delayed motor development with delayed walking. Two sisters had a more severe form of the disorder, with an unsteady gait apparent since learning to walk, whereas the third developed unsteady gait around age 7 years. Other features included dysarthria, upper limb involvement, abnormal eye movements, and hyporeflexia. Two patients had increased reflexes in the lower limbs. At age 7 months the 2 sisters who were more severely affected developed epilepsy, which was responsive to treatment with no relapse in either girl since age 3 years; both subsequently showed moderate mental retardation. Brain MRI was normal in the 3 girls at ages 16, 9, and 8 years, respectively, but showed mild cerebellar atrophy and prominent folia in 1 patient at age 18 years, suggesting progression of the disorder. At ages 16 to 25 years, they had limited walking without aid, but were unable to run.

Seidahmed et al. (2020) reported 2 brothers, born of consanguineous Saudi parents, with SCAR15. The sibs (18DG0163) had previously been reported by Maddirevula et al. (2019). The 6.5-year-old proband, who was born at 33 weeks' gestation, sat at age 1 year. He and his 17-year-old brother had delayed walking and always walked with an unsteady gait. They also had delayed speech, which was dysarthric. Cognitive abilities were mildly impaired in the younger sib and borderline in his brother, who was enrolled in special education. The younger brother had no signs of ataxia in the upper or lower limbs. In the older brother, deep tendon reflexes were enhanced in the lower limbs. He had mild upper limb, lower limb, and gait ataxia on tandem walking. Brain auditory evoked response testing revealed increased hearing threshold bilaterally. MRI at age 16 years revealed minimal superior vermian atrophy.


Inheritance

The transmission pattern of spinocerebellar ataxia in the family reported by Assoum et al. (2010) was consistent with autosomal recessive inheritance.


Molecular Genetics

In 3 sisters, born of consanguineous Saudi Arabian parents, with autosomal recessive spinocerebellar ataxia, Assoum et al. (2010) identified a homozygous mutation in the KIAA0226 gene (c.2624delC; 613516.0001). The mutation, which was found by homozygosity mapping and candidate gene sequencing, segregated with the disorder in the family. The mutation results in the loss of the highly conserved DAG binding-like motif. Heterozygous carriers were unaffected. No mutations in the KIAA0226 gene were found in 172 additional families with non-Friedreich (FRDA; 229300) ataxia. Assoum et al. (2013) found that transfection of mutant KIAA0226 in COS-1 and HeLa cells resulted in mislocalization of the mutant protein from the late endosome and lysosomes to diffuse cytosolic distribution. The findings suggested that the mutation results in a loss of proper protein function, and that the disorder may relate to defects in endolysosomal machinery.

In 2 brothers, born to first-cousin Saudi parents, with SCAR15, Seidahmed et al. (2020) identified homozygosity for the same c.2624delC mutation in the RUBCN gene that had been described by Assoum et al. (2013) in another Saudi family. The mutation, which was identified by whole-exome sequencing, segregated with the disease in the family. By autozygosity mapping focused on the smallest shared region of homozygosity and mutation age analysis, Seidahmed et al. (2020) showed that the mutation occurred approximately 1,550 years earlier, spanning about 62 generations.


REFERENCES

  1. Assoum, M., Salih, M. A., Drouot, N., H'Mida-Ben Brahim, D., Lagier-Tourenne, C., AlDrees, A., Elmalik, S. A., Ahmed, T. S., Seidahmed, M. Z., Kabiraj, M. M., Koenig, M. Rundataxin, a novel protein with RUN and diacylglycerol binding domains, is mutant in a new recessive ataxia. Brain 133: 2439-2447, 2010. [PubMed: 20826435] [Full Text: https://doi.org/10.1093/brain/awq181]

  2. Assoum, M., Salih, M. A., Drouot, N., Hnia, K., Martelli, A., Koenig, M. The Salih ataxia mutation impairs Rubicon endosomal localization. Cerebellum 12: 835-840, 2013. [PubMed: 23728897] [Full Text: https://doi.org/10.1007/s12311-013-0489-4]

  3. Maddirevula, S., Alzahrani, F., Al-Owain, M., Al Muhaizea, M. A., Kayyali, H. R., AlHashem, A., Rahbeeni, Z., Al-Otaibi, M., Alzaidan, H. I., Balobaid, A., El Khashab, H. Y., Bubshait, D. K., and 36 others. Autozygome and high throughput confirmation of disease genes candidacy. Genet. Med. 21: 736-742, 2019. [PubMed: 30237576] [Full Text: https://doi.org/10.1038/s41436-018-0138-x]

  4. Seidahmed, M. Z., Hamad, M. H., AlBakheet, A., Elmalik, S. A., AlDrees, A., Al-Sufayan, J., Alorainy, I., Ghozzi, I. M., Colak, D., Salih, M. A., Kaya, N. Ancient founder mutation in RUBCN: a second unrelated family confirms Salih ataxia (SCAR15). BMC Neurol. 20: 207, 2020. [PubMed: 32450808] [Full Text: https://doi.org/10.1186/s12883-020-01761-w]


Contributors:
Hilary J. Vernon - updated : 09/11/2020

Creation Date:
Cassandra L. Kniffin : 3/24/2014

Edit History:
carol : 10/08/2020
carol : 09/12/2020
carol : 09/11/2020
carol : 04/17/2019
carol : 03/24/2014
ckniffin : 3/24/2014