Tag: YouTube

NCBI on YouTube: Customize MSA Viewer, SciENcv, plants and RNA-Seq data, Datasets and PubMed

Missed a few videos on YouTube? Here’s the latest from our channel.

Customize the MSA Viewer to Make Your Analysis Easier

We’re constantly improving the Multiple Sequence Alignment (MSA) Viewer. This video demonstrates several new and popular features, including the ability to change data columns, hide selected rows, analyze polymorphisms, and more.

Continue reading “NCBI on YouTube: Customize MSA Viewer, SciENcv, plants and RNA-Seq data, Datasets and PubMed”

NCBI on YouTube: Tips for My Bibliography, Genome Data Viewer and more

Missed our latest YouTube videos? Scroll down to see what we’ve been up to.

Add Preprint Citations in My Bibliography

The National Institutes of Health encourages investigators to post preprints to public repositories in order to speed the dissemination and enhance the rigor of their work. This video demonstrates how to add preprint citations to My Bibliography.

Continue reading “NCBI on YouTube: Tips for My Bibliography, Genome Data Viewer and more”

NCBI on YouTube: Get the most out of NCBI resources with these videos

Check out the latest videos on YouTube to learn how to best use NCBI graphical viewers, SRA, PGAP, and other resources.

Genome Data Viewer: Analyzing Remote BAM Alignment Files and Other Tips

This video shows you how to upload remote BAM files, and succinctly demonstrates handy viewer settings, such as Pileup display options, and highlights the very helpful tooltips in the Genome Data Viewer (GDV). There’s also a brief blog post on the same topic.

Continue reading “NCBI on YouTube: Get the most out of NCBI resources with these videos”

NCBI on YouTube: new videos on PubMed, My Bibliography, sequence data and more

Here are the latest videos on our YouTube channel. Subscribe to get alerts for new videos.

Introducing the Genome Submission Wizard in Genome Workbench v3.0

Genome Workbench version 3 is a major upgrade, including the addition of the Genome Submission Wizard. This video guides you through the wizard, from uploading your genome data file to completion of the submitter report, which is ready to submit to GenBank using tools such as Submission Portal or BankIt. Note: An on-line tutorial is under “Manuals” on the Genome Workbench home page.

https://www.youtube.com/watch?v=fnpf9PVAS1w

Continue reading “NCBI on YouTube: new videos on PubMed, My Bibliography, sequence data and more”

NCBI on YouTube: Request access to controlled data in dbGaP

NCBI on YouTube: Request access to controlled data in dbGaP

Do you need access to controlled data in the database of Genotypes and Phenotypes (dbGaP)? This short video will show you how to request data today!

dbGaP archives and distributes the data and results from studies that have investigated the interaction of genotype and phenotype in humans. Responsible stewardship of controlled-access data subject to the NIH GDS Policy is shared among the NIH, the investigators approved to access the data, and the investigators’ institutions.

5 new videos on YouTube: Get the most out of BLAST, MedGen, PubChem and more

Here are the latest videos on our YouTube channel. Subscribe to get alerts for new videos.

NCBI Minute: Getting the Most out of Web BLAST Tabular Format

The NCBI web BLAST service has several useful download formats, including tabular formats. All formats allow you to easily save your BLAST results for processing, editing, and annotating.

This video will show you how to use basic Unix tools and EDirect to expand and enhance your tabular saved BLAST results. You will also see learn how to add useful information like taxonomy and sequence titles.

Continue reading “5 new videos on YouTube: Get the most out of BLAST, MedGen, PubChem and more”

Tour the NCBI’s Genome Data Viewer, Bookshelf, Pathogen Isolates Detection Browser and other resources on YouTube

Several of the latest videos on the NCBI YouTube channel highlight NCBI resources. Subscribe to the channel to see all our new videos.

NCBI’s Genome Data Viewer – Introducing the BLAST Widget

A brief introduction into how the BLAST widget, a new addition to the Genome Data Viewer, helps you see your BLAST results in the context of assembled genome sequences.

Continue reading “Tour the NCBI’s Genome Data Viewer, Bookshelf, Pathogen Isolates Detection Browser and other resources on YouTube”

New videos on YouTube: NCBI resources, QuickBlastP, update to API keys for E-Utils, and advanced use of API keys

Need a refresher of what NCBI offers? Or just feel you aren’t taking full advantage of NCBI resources? Check out some of NCBI’s most recent recordings of NCBI Minute webinars up on the NCBI YouTube channel.

Continue reading “New videos on YouTube: NCBI resources, QuickBlastP, update to API keys for E-Utils, and advanced use of API keys”

Two new videos on YouTube: SRA RunSelector & NCBI Hackathons

Two new videos on YouTube: SRA RunSelector & NCBI Hackathons

We’ve uploaded recordings from two recent NCBI Minute webinars on the NCBI YouTube channel.

The first, “Using the SRA RunSelector to Find NGS Datasets”, shows you how to filter the SRA database using metadata details from submitted datasets.

 

Continue reading “Two new videos on YouTube: SRA RunSelector & NCBI Hackathons”