Package: curatedMetagenomicAnalyses
Title: Analyses using curatedMetagenomicData
Version: 0.4.0
Authors@R:
  c(person(given = "Levi", family = "Waldron", role = "aut"),
    person(given = "Paolo", family = "Manghi", role = "aut"),
    person(given = "Davide", family = "Galzato", role = "aut"),
    person(given = "Lucas", family = "Schiffer", role = "aut"),
    person(given = "Jennifer", family = "Wokaty", role = c("ctb", "cre"),
           email = "jennifer.wokaty@sph.cuny.edu"))
Description: This package is a home for significant analyses using curatedMetagenomicData.
License: CC BY 4.0
Encoding: UTF-8
LazyData: true
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.1.2
Imports:
    curatedMetagenomicData,
    dplyr,
    meta
Suggests:
    ANCOMBC,
    BiocStyle,
    DT,
    forcats,
    ggplot2,
    ggrepel,
    ggsignif,
    gtsummary,
    hrbrthemes,
    kableExtra,
    knitr,
    mia,
    RefManageR,
    rmarkdown,
    scater,
    sessioninfo,
    SIAMCAT,
    snakecase,
    stringr,
    table1,
    tibble,
    tidyr,
    tidyverse,
    TreeSummarizedExperiment,
    uwot,
    vegan
VignetteBuilder: knitr
biocViews:
    ExperimentHub,
    MicrobiomeData,
    ReproducibleResearch
URL: https://github.com/waldronlab/curatedMetagenomicAnalyses