-
Notifications
You must be signed in to change notification settings - Fork 136
Home
Hadrien Gourlé edited this page Jul 21, 2017
·
15 revisions
Welcome to the MEGAHIT wiki!
A: Since version 0.3.0, MEGAHIT will set the memory for its sdbg_builder automatically. For manual setting, please refer to this page.
A: Yes since version 0.3.0. In previous version PE reads are taken by MEGAHIT as Single-ended.
A: Please refer to this page. However, basically --input-cmd is not recommended since version 0.3.0, because all reads input in this way are taken as single-ended.
A: Yes. Please refer to Visualizing-MEGAHIT's-contig-graph.
A: Recompile MEGAHIT by make clean && make disablempopcnt=1.
A: See this post.