Seurat v4.0.3 #4608
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Seurat v4.0.3 #4608
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add CIPR to wrappers table
explicitly specify reference.reduction in mapping vignette
check reference.reduction in FindTransferAnchors
Check if SingleCellExperiment is installed before checking Kill tests that require Bioc 3.13/R 4.1
Update changelog
Bugfix to as.SingleCellExperiment
Currently, UpdateSymbolList will sometimes provide alternate names rather than simply updating old names This patch exposes the search types in GeneSymbolThesarus to the user and forces the search perfomed by UpdateSymbolList to only be updates
fix assay metadata setting error
UpdateSymbolList no longer searches aliases
transfer scale.data slot to assay in SCE conversion
enable alpha parameter for SpatialDimPlot
fix sce conversion when reducedDim is missing names
Add jitter option to FeatureScatter
Prep for release of 4.0.3
andrewwbutler
approved these changes
Jun 11, 2021
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Patch release to improve
Seurat→SingleCellExperimentconversion and fixes forUpdateSymbolList; please see our NEWS file for more details