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MapQuery unable to exit when wrong input is inputted #5373

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@Chengwei94

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When using the mapquery function with wrong inputs such as not returning umap model in the previous step or putting the wrong columns in the refdata variable, the function just shows the error and the function get stuck there, instead of ending the function. I have to kill my R process everytime to exit.

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torkencz

torkencz commented on Dec 10, 2021

@torkencz
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Can you provide more information on the session you are running and maybe the code as well.

removed
bugSomething isn't working
on Dec 10, 2021
yuhanH

yuhanH commented on Dec 10, 2021

@yuhanH
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We also notice that if you put wrong input into MapQuery, it will be ending normally. We are working on it.

self-assigned this
on Dec 10, 2021
yuhanH

yuhanH commented on Dec 16, 2021

@yuhanH
Collaborator

hi @Chengwei94
In the latest version seurat (4.0.6), when you put wrong input, MapQuery should just return the error info.

removed their assignment
on Dec 16, 2021
no-response

no-response commented on Dec 24, 2021

@no-response

This issue has been automatically closed because there has been no response to our request for more information from the original author. With only the information that is currently in the issue, we don't have enough information to take action. Please reach out if you have or find the answers we need so that we can investigate further.

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      MapQuery unable to exit when wrong input is inputted · Issue #5373 · satijalab/seurat