Search results

Add Python pickle buffer support

performance

Status: Open.

#1080 In salilab/imp;

· benmwebb opened on Mar 30, 2023

IMP/pmi returns type error during RB construction

Status: Open.

#1074 In salilab/imp;

· Pellarin opened on Nov 22, 2022

SampledDensityMap - Which constructor is chosen affects results.

bug

IMP.emRelated to modules/emRelated to modules/em

Status: Open.

#1036 In salilab/imp;

· ichem001 opened on Nov 9, 2020

Missing volume estimates for nucleic acids

feature request

IMP.atom

Status: Open.

#1027 In salilab/imp;

· benmwebb opened on Dec 9, 2019

 ·  

IMP 2.13.0 release

RWMC fails for bounded Nuisances with defined score at the boundary

Status: Open.

#1023 In salilab/imp;

· sethaxen opened on Sep 8, 2019

Introduce families of distributions and a DistributionRestraint

feature request

Status: Open.

#1021 In salilab/imp;

· sethaxen opened on Sep 7, 2019

Raise exception when derivatives are requested from non-differentiable restraint

Status: Open.

#1020 In salilab/imp;

· sethaxen opened on Sep 7, 2019

GSL simplex error when using high pixel size in EM2D

Status: Open.

#1014 In salilab/imp;

· ichem001 opened on May 24, 2019

Add SingletonDerivativeModifier complement to TransformationSymmetry

feature request

Status: Open.

#1011 In salilab/imp;

· sethaxen opened on Sep 26, 2018

Add interface to NAMD

feature request

Status: Open.

#1010 In salilab/imp;

· benmwebb opened on Sep 20, 2018

Reimplement Nuisance to sample in an unconstrained space

feature request

IMP.isd

Status: Open.

#1007 In salilab/imp;

· sethaxen opened on Aug 9, 2018

Truncate IMP.isd.GaussianRestraint and IMP.isd.StudentTRestraint properly

IMP.isd

Status: Open.

#1006 In salilab/imp;

· sethaxen opened on Jul 30, 2018

SampledDensityMap - Model and map generated from model do not align.

bug

Status: Open.

#1002 In salilab/imp;

· ichem001 opened on Apr 3, 2018

XLs restraint: stat file reports only the likelihood as score

Status: Open.

#1000 In salilab/imp;

· iecheverria opened on Feb 9, 2018

error in CloseBipartitePairContainer when including pairs on same rigid body

bug

Status: Open.

#998 In salilab/imp;

· jtempkin opened on Nov 17, 2017

missing density band when using SampledDensityMaps

Status: Open.

#987 In salilab/imp;

· ichem001 opened on Jul 31, 2017

Track provenance information for all modeling inputs

feature request

Status: Open.

#976 In salilab/imp;

· benmwebb opened on Apr 18, 2017

Consider using DCD or other formats for trajectories

feature request

Status: Open.

#964 In salilab/imp;

· benmwebb opened on Sep 30, 2016

Speed up release build

feature request

performance

Status: Open.

#963 In salilab/imp;

· benmwebb opened on Sep 14, 2016

IMP.em.FitRestraint is much slower with use_rigid_bodies = True

performance

Status: Open.

#954 In salilab/imp;

· jkosinski opened on Jun 29, 2016

Add an IMP.atom.get_leaves(hier) which is aware of representations

Status: Open.

#947 In salilab/imp;

· cgreenberg opened on May 8, 2016

Overload RotamerCalculator.get_rotamer() to take ResidueType and necessary coordinate elements

feature request

Status: Open.

#936 In salilab/imp;

· sethaxen opened on Feb 17, 2016

Representation decorator needs a base_type

IMP.atom

Status: Open.

#918 In salilab/imp;

· cgreenberg opened on Jan 11, 2016

Density sampling and EM projections not working as expected

Status: Open.

#915 In salilab/imp;

· ichem001 opened on Nov 5, 2015

Use standard CMake macros to generate export headers

feature request

Status: Open.

#912 In salilab/imp;

· benmwebb opened on Sep 8, 2015