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Added missing dependencies to run Epinano_Variant.py #74

Merged
merged 2 commits into from
Feb 8, 2021
Merged

Added missing dependencies to run Epinano_Variant.py #74

merged 2 commits into from
Feb 8, 2021

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kxk302
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@kxk302 kxk302 commented Dec 7, 2020

In order to run the command 'python3 Epinano_variant.py -h', I had to add the following dependencies to INSTALL.h file. Afterwards, the command 'python3 Epinano_variant.py -h' runs without erroring out on missing dependencies.

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@Huanle Huanle left a comment

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Hi@kxk302,
I do not understand what this is for.
Can you explain it a bit in detail?
Thanks!

@kxk302
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kxk302 commented Feb 8, 2021

Hi @Huanle
I had to add the following to INSTALL.h file, to run the 'python3 Epinano_variant.py -h' successfully. It seems some dependencies were missing from the file.

pip install toolz==0.11.1
pip install fsspec==0.3.3
pip install cloudpickle==1.6.0

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Huanle commented Feb 8, 2021

interesting, i did not realize that. @kxk302 .
if that's the case, let's merge.

@Huanle Huanle merged commit d6f0285 into novoalab:master Feb 8, 2021
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2 participants