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Dev > Master #58

Merged
merged 163 commits into from
Nov 5, 2019
Merged

Dev > Master #58

merged 163 commits into from
Nov 5, 2019

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drpatelh
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@drpatelh drpatelh commented Oct 30, 2019

Many thanks to contributing to nf-core/atacseq!

Please fill in the appropriate checklist below (delete whatever is not relevant). These are the most common things requested on pull requests (PRs).

PR checklist

  • This comment contains a description of changes (with reason)
  • If you've fixed a bug or added code that should be tested, add tests!
  • If necessary, also make a PR on the nf-core/atacseq branch on the nf-core/test-datasets repo
  • Ensure the test suite passes (nextflow run . -profile test,docker).
  • Make sure your code lints (nf-core lint .).
  • Documentation in docs is updated
  • CHANGELOG.md is updated
  • README.md is updated

Learn more about contributing: https://github.com/nf-core/atacseq/tree/master/.github/CONTRIBUTING.md

drpatelh and others added 30 commits April 11, 2019 11:35
Create TEMPLATE branch for automated syncing
Create TEMPLATE branch for automated syncing
Bump version to 1.0.1dev
Create an empty channel for blacklist when params.blacklist is false.
Use staged blacklist file in makeGenomeFilter
Allocate more RAM to the process running MACS2
@drpatelh drpatelh requested a review from a team October 30, 2019 22:08
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@maxulysse maxulysse left a comment

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Looks amazing

@drpatelh
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drpatelh commented Nov 1, 2019

Thanks @maxulysse !! Just need one more approval on this and we are ready to go ✈️

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@apeltzer apeltzer left a comment

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Just mini things, nothing that doesn't mean approved 👍

CHANGELOG.md Outdated
The format is based on [Keep a Changelog](http://keepachangelog.com/en/1.0.0/)
and this project adheres to [Semantic Versioning](http://semver.org/spec/v2.0.0.html).

## [1.1.0] - 2019-11-01
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Suggested change
## [1.1.0] - 2019-11-01
## [1.1.0] - 2019-11-05

Maybe 5th?

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Ah, that's been changed in the open PR to dev 👍

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I'll merge that last minute before the merge to master

@@ -2,7 +2,7 @@

#######################################################################
#######################################################################
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I think I'll get this going for Eager soon too 👍 Looks fab :-)

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Thanks. It does work really well, restricts user error and gives you experiment-level info 😃

Address comments for PR #58 (Dev > Master)
@drpatelh drpatelh merged commit fa1e3f8 into master Nov 5, 2019
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4 participants