This version should now be compatible with WSL2.

The client IP address is determined by examining the IP addresses from all network adapters. IP addresses in the 172.xxx.xxx.xxx subnet are ignored. The first non-ignored IP address is considered to be the one of the client.

For non-windows systems no relevant changes are made.

This release contains several bug-fixes for templates:

• some templates are now Mac OS compatible (with brew)
• a bug preventing the use of First Time Ubuntu templates has been fixed (if dos2unix had not yet been installed)

Further improvements:

• The user-guide has been updated.
• Additional explanation of how to create templates oneself has been added.
• Video Tutorial on how to use bioGUI

The number of bioGUI install templates has been extended to allow usage in NGS transcriptomic workflows (hisat2, ms-EmpiRe, ...) as well as in hybrid Illumina and long-read assemblies (spades, wtdbg2, Minimap2/Miniasm/racon ).

Find below builds for

• Windows (zip)
• Mac OS (dmg)
• Linux (tar.gz)

Windows/WSL Users please follow the instructions to setup WSL as well as the user guide.

Mac Users should follow the user guide due to Mac OS security features.

If you experience problems, raise an issue or contact the author joppich|at|bio.ifi.lmu.de

bioGUI v1.1.1 release

In this release the supporting website has been extended to support the automatic request of a new template.

Additionally also non-Windows Insider WSL is now supported.

In order to install the software on Windows, download bioGUI_win_v1_1_1.zip and un-zip it to your desired location (preferably not in C:\Program Files\ ).
Then simply double-click the bioGUI executable.

For Linux/Ubuntu use the bioGUI_unix_v1_1_1.tar.gz file instead.

Mac users please use bioGUI_mac_v1_1_1.dmg and drag the bioGUI app into their Applications folder.

The default application directory for Linux/Ubuntu/Mac/WSL is ~/.local/share/bioGUI - all programs will be installed into this subdirectory.

You can find a detailed manual for bioGUI at readthedocs. There users will find a section how to setup bioGUI on Windows and developers will find information on how to script templates.

An animated video of how to use bioGUI (First Time Install/Setup) showing the graphmap installation examplarily can be found on the repository readme.

UPD 190118: Updated Windows binaries due to OpenSSL incompatibilities.

bioGUI v1.1 release

In this release the supporting website has been extended to support the automatic request of a new template.

Additionally also the non-Insider WSL are now supported.

In order to install the software on Windows, download bioGUI.zip and un-zip it to your desired location.
Then simply double-click the bioGUI executable.

For Linux/Ubuntu use the bioGUI_unix.zip file instead.

You can find a detailed manual for bioGUI at readthedocs. There users will find a section how to setup bioGUI on Windows and developers will find information on how to script templates.

Initial bioGUI release

First release of bioGUI!

Please read the full documentation, especially if you are going to use Windows Subsystem for Linux on Windows 10.

bioGUI v0.1

Only code available by now.