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Validate Docker 1.10 #19720

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vishh opened this issue Jan 15, 2016 · 140 comments
Closed

Validate Docker 1.10 #19720

vishh opened this issue Jan 15, 2016 · 140 comments
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priority/important-soon Must be staffed and worked on either currently, or very soon, ideally in time for the next release. sig/node Categorizes an issue or PR as relevant to SIG Node.

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@vishh
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vishh commented Jan 15, 2016

We have just pushed 1.10.0-rc1 to test.docker.com you can download with the following:

Ubuntu/Debian: curl -fsSL https://test.docker.com/ | sh
Linux 64bit tgz: https://test.docker.com/builds/Linux/x86_64/docker-1.10.0-rc1.tgz

IMPORTANT:

Docker 1.10 uses a new content-addressable storage for images and layers.
A migration is performed the first time docker is run, and can take a significant
amount of time depending on the number of images and containers present.

Refer to this page on the wiki for more information:
https://github.com/docker/docker/wiki/Engine-v1.10.0-content-addressability-migration

We also released a cool migration utility that enables you to perform the migration
before updating to reduce downtime. Engine 1.10 migrator can be found on Docker Hub;

https://hub.docker.com/r/docker/v1.10-migrator/

@kubernetes/sig-node

@vishh vishh added priority/important-soon Must be staffed and worked on either currently, or very soon, ideally in time for the next release. sig/node Categorizes an issue or PR as relevant to SIG Node. labels Jan 15, 2016
@dchen1107
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@Random-Liu Can you pick up this work along with Huawei friends?

@Random-Liu
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@dchen1107 Sure. We could also talk about this on Tuesday meeting, :)

@yujuhong
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@Random-Liu It will be a good start to try creating a cluster with docker 1.10 and leave it over the weekend if you have time today.

@vishh
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vishh commented Jan 16, 2016

FYI: Instructions to update salt to use the new docker rc can be found here

@Random-Liu
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@yujuhong @vishh Thank you very much~

@vishh
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vishh commented Jan 20, 2016

@vishh
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vishh commented Jan 28, 2016

@Random-Liu
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@vishh Thank you very much~

Now the main problem is that the option "-d" is completed deprecated in docker 1.10, while our ContainerVM is still using it.

@dchen1107 is helping me solve this problem, after that I'll start a cluster and test it ASAP. :)

@yujuhong
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@Random-Liu, you can also make a one time change and run any non-reboot tests :-)

@Random-Liu
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@yujuhong Thanks, let me try it.

@Random-Liu
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With the help of @dchen1107, I finally start the cluster successfully. I'll send a PR to add more instruction in the comments of init.sls, and I'll start running test.

@Random-Liu
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I don't know whether the test suite I run is correct...
The test I run: go run hack/e2e.go -v -test

Docker version:

Client:
 Version:      1.10.0-rc1
 API version:  1.22
 Go version:   go1.5.3
 Git commit:   677c593
 Built:        Fri Jan 15 18:33:20 2016
 OS/Arch:      linux/amd64
Server:
 Version:      1.10.0-rc1
 API version:  1.22
 Go version:   go1.5.3
 Git commit:   677c593
 Built:        Fri Jan 15 18:33:20 2016
 OS/Arch:      linux/amd64

My cluster is sync up to: 3db1a6c

the following result:

Summarizing 20 Failures:

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] ReplicationController [It] Should scale from 1 pod to 3 pods and from 3 to 5 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Pods [It] should be restarted with a docker exec "cat /tmp/health" liveness probe [Conformance] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pods.go:109

[Fail] Kubectl client Simple pod [It] should support exec through an HTTP proxy 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/kubectl.go:397

[Fail] Services [It] should be able to create a functioning NodePort service 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:414

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] Deployment [It] Should scale from 5 pods to 3 pods and from 3 to 1 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Services [It] should work after restarting kube-proxy [Disruptive] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:295

[Fail] Pods [It] should support remote command execution over websockets 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pods.go:768

[Fail] Pod Disks [It] should schedule a pod w/two RW PDs both mounted to one container, write to PD, verify contents, delete pod, recreate pod, verify contents, and repeat in rapid succession [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:255

[Fail] Services [It] should release NodePorts on delete 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:796

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] Deployment [It] Should scale from 1 pod to 3 pods and from 3 to 5 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Kubectl client Simple pod [It] should support exec 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:1262

[Fail] Services [It] should be able to up and down services 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:243

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] ReplicationController [It] Should scale from 5 pods to 3 pods and from 3 to 1 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] KubeletManagedEtcHosts [It] should test kubelet managed /etc/hosts file 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/kubelet_etc_hosts.go:137

[Fail] Services [It] should work after restarting apiserver [Disruptive] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:336

[Fail] PrivilegedPod [It] should test privileged pod 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:2281

[Fail] Pod Disks [It] should schedule a pod w/ a RW PD shared between multiple containers, write to PD, delete pod, verify contents, and repeat in rapid succession [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:202

[Fail] KubeProxy [It] should test kube-proxy [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:2281

[Fail] Pod Disks [It] should schedule a pod w/ a RW PD, remove it, then schedule it on another host 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:95

[Fail] PreStop [It] should call prestop when killing a pod [Conformance] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pre_stop.go:158

Ran 150 of 221 Specs in 14835.337 seconds
FAIL! -- 130 Passed | 20 Failed | 2 Pending | 69 Skipped --- FAIL: TestE2E (14835.92s)
FAIL

@Random-Liu
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I run the e2e test a second time, and got the same result:

Summarizing 20 Failures:

[Fail] Pod Disks [It] should schedule a pod w/two RW PDs both mounted to one container, write to PD, verify contents, delete pod, recreate pod, verify contents, and repeat in rapid succession [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:255

[Fail] PreStop [It] should call prestop when killing a pod [Conformance] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pre_stop.go:158

[Fail] Pod Disks [It] should schedule a pod w/ a RW PD, remove it, then schedule it on another host 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:95

[Fail] Pod Disks [It] should schedule a pod w/ a RW PD shared between multiple containers, write to PD, delete pod, verify contents, and repeat in rapid succession [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pd.go:202

[Fail] Services [It] should work after restarting apiserver [Disruptive] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:336

[Fail] Pods [It] should support remote command execution over websockets 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pods.go:768

[Fail] KubeletManagedEtcHosts [It] should test kubelet managed /etc/hosts file 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/kubelet_etc_hosts.go:137

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] Deployment [It] Should scale from 1 pod to 3 pods and from 3 to 5 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] ReplicationController [It] Should scale from 1 pod to 3 pods and from 3 to 5 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Services [It] should be able to up and down services 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:243

[Fail] Pods [It] should be restarted with a docker exec "cat /tmp/health" liveness probe [Conformance] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/pods.go:109

[Fail] KubeProxy [It] should test kube-proxy [Slow] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:2281

[Fail] Services [It] should be able to create a functioning NodePort service 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:414

[Fail] Kubectl client Simple pod [It] should support exec 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:1262

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] ReplicationController [It] Should scale from 5 pods to 3 pods and from 3 to 1 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] Kubectl client Simple pod [It] should support exec through an HTTP proxy 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/kubectl.go:397

[Fail] Services [It] should release NodePorts on delete 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:796

[Fail] Horizontal pod autoscaling (scale resource: CPU) [Serial] [Slow] Deployment [It] Should scale from 5 pods to 3 pods and from 3 to 1 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/autoscaling_utils.go:249

[Fail] PrivilegedPod [It] should test privileged pod 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/util.go:2281

[Fail] Services [It] should work after restarting kube-proxy [Disruptive] 
/go/src/k8s.io/kubernetes/_output/dockerized/go/src/k8s.io/kubernetes/test/e2e/service.go:295

Ran 150 of 221 Specs in 14451.203 seconds
FAIL! -- 130 Passed | 20 Failed | 2 Pending | 69 Skipped --- FAIL: TestE2E (14451.57s)

@Random-Liu
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Status update:
After update docker to 1.10~rc2, I can't start up the cluster again, with the error:
docker: error while loading shared libraries: libsystemd-journal.so.0: cannot open shared object file: No such file or directory

@vishh
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vishh commented Feb 1, 2016

Are we using the official debian package for rc2? If yes, can you file an issue against docker for this?

@dchen1107
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Looks like docker 1.10-rc2 adds a dependency to libsystemd-journal0 (>= 201) which is not required by docker 1.10-rc1

@Random-Liu
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Yeah, I'm using the official debian package for rc2 from http://apt.dockerproject.org/repo/pool/testing/d/docker-engine/

@Random-Liu
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FYI, I found a relative issue for docker 1.9.1 moby/moby#19230.

@dchen1107
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No the problem is from our recent debian backport images on which we build containervm-image:

The following packages have unmet dependencies:
docker-engine : Depends: libsystemd-journal0 (>= 201) but 44-11+deb7u4 is to be installed
Recommends: cgroupfs-mount but it is not going to be installed or
cgroup-lite but it is not installable
Recommends: yubico-piv-tool (>= 1.1.0~) but it is not installable
E: Unable to correct problems, you have held broken packages.

cc/ @zmerlynn

@zmerlynn
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zmerlynn commented Feb 1, 2016

I'm confused. container-vm has never (yet) used the official docker-engine package. I'm happy if someone wants to work with me (internally) on getting it over to the package, but I actually don't have the time. The image builder currently just slaps binaries down into place.

@zmerlynn
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zmerlynn commented Feb 1, 2016

Ah, yeah, it looks like rc2 is broken for wheezy. https://packages.debian.org/wheezy/libsystemd-journal0

@dchen1107
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@zmerlynn It is broken for our recent ones: 1) Debian 3.16.7-ckt11-1+deb8u6~bpo70+1 (2015-11-11)
2) Debian 3.16.7-ckt20-1+deb8u4google (2016-01-26)

But works for the old container vm image: Debian 3.16.7-ckt11-1+deb8u5 (2015-10-09)

@zmerlynn
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zmerlynn commented Feb 2, 2016

container-vm-v20151215 (Debian 3.16.7-ckt11-1+deb8u6~bpo70+1) has a relatively straightforward changelog from a bootstrap-vz point of view, trying to see if the manifest got messed up somehow.

@zmerlynn
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zmerlynn commented Feb 2, 2016

I repro'd on a pretty old CVM (container-vm-v20151103):

zml@cvm-2:~$ sudo apt-get install docker-engine=1.10.0~rc2-0~wheezy
Reading package lists... Done
Building dependency tree       
Reading state information... Done
Some packages could not be installed. This may mean that you have
requested an impossible situation or if you are using the unstable
distribution that some required packages have not yet been created
or been moved out of Incoming.
The following information may help to resolve the situation:

The following packages have unmet dependencies:
 docker-engine : Depends: libsystemd-journal0 (>= 201) but 44-11+deb7u4 is to be installed
                 Recommends: cgroupfs-mount but it is not going to be installed or
                             cgroup-lite but it is not installable
                 Recommends: yubico-piv-tool (>= 1.1.0~) but it is not installable
E: Unable to correct problems, you have held broken packages.
zml@cvm-2:~$ uname -a
Linux cvm-2 3.16.0-0.bpo.4-amd64 #1 SMP Debian 3.16.7-ckt11-1+deb8u4~bpo70+1 (2015-09-22) x86_64 GNU/Linux

?

@dchen1107
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@Random-Liu showed me that he has docker 1.10-rc2 works on container vm image: Debian 3.16.7-ckt11-1+deb8u5 (2015-10-09) earlier

@timothysc
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timothysc commented May 31, 2016

@yujuhong
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"operation timeout: context deadline exceeded" would only happen if a request takes over > 2 min.
@Random-Liu ran docker microbenchmark for docker v1.10 before IIRC, and didn't see any obvious problem.
@timothysc, did redhat see any performance issues when testing docker only (not with kubelet)?

@timothysc
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@yujuhong @rrati is testing that right now.

@Random-Liu
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Random-Liu commented May 31, 2016

@timothysc @yujuhong We only run benchmark for docker 1.9 before, because we finally decided to go with 1.9 at that time. #19720 (comment)
I've started a node to run benchmark against docker 1.10, will post some data later.

@yujuhong
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@timothysc @yujuhong We only run benchmark for docker 1.9 before, because we finally decided to go with 1.9 at that time. #19720 (comment)

@Random-Liu my bad. I thought we did that.

@Random-Liu
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@yujuhong The VM hung with 100% cpu usage during benchmark running...I can't access the VM now. May have to create a new environment now.

@bacongobbler
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bacongobbler commented Jun 1, 2016

Slightly off-topic, but do you all do testing against Docker that is packaged and maintained by certain distros, e.g. Fedora's Docker or just the official packages? From my own testing their fork has also got its own set of issues not found in the official Docker packages, but it's currently being used with kube-up on Vagrant. Just wondering if I should make a PR to change the vagrant provider to install the official Docker package instead so all providers are using the same package.

@derekwaynecarr
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@bacongobbler - For RHEL based platforms (RHEL, Centos, Fedora), we at Red Hat test with the package provided by our distribution, and any upstream testing feedback we provide to the Kubernetes project is against that distribution as well.

This includes the recommendation that we will make for our platforms with Kubernetes 1.3

The version of docker we package in RHEL-based platforms has an explicit list of the patches we carry.

Many of those patches are fixes we backport into docker 1.10 rather than force users to wait for docker 1.11.

For example, a vanilla docker 1.10 may have the following issue:

But we carry the fix in our distribution rather than force users to wait/use docker 1.11:

The vagrant environment on each node should currently be using the docker 1.10 from here:

The Vagrant VM represents a setup for how Kubernetes should run on that particular distribution. This means its an ideal environment to ensure we conform to the systemd node spec as it evolves, that we work properly with the docker systemd cgroup driver, and that selinux functions as expected for users that require it.

If you want to change the version of docker installed in the vagrant environment, I would accept a PR that made it an option in config-default.sh similar to how overlay can be used instead of devicemapper.

@timothysc
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Our density results again 1.10 are showing a lag when compared against upstream 1.11 results.

But it don't think it's an apples to apples comparison. @gmarek what is the size of the nodes on the 100 node test cluster.

/cc @kubernetes/sig-scalability

@yujuhong
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yujuhong commented Jun 1, 2016

@timothysc If you were asking about the gce-scalibility suite, below is the information from the build log.

12:30:14 + export MASTER_SIZE=n1-standard-4
12:30:14 + MASTER_SIZE=n1-standard-4
12:30:14 + export NODE_SIZE=n1-standard-2
12:30:14 + NODE_SIZE=n1-standard-2
12:30:14 + export NODE_DISK_SIZE=50GB
12:30:14 + NODE_DISK_SIZE=50GB
12:30:14 + export NUM_NODES=100
12:30:14 + NUM_NODES=100

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gmarek commented Jun 2, 2016

@timothysc - as @yujuhong we're using n1-standard-2 machines. In bigger clusters we generally use n1-standard-1's.

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v1.9 results copied from this comment

Introduction
I benchmarked docker v1.10 using the docker micro benchmark tool.

Benchmark Environment

  • Cloud Provider: GCE
  • VM Instance: n1-standard-2 (2 vCPUs, 7.5 GB memory)
  • OS: Debian GNU/Linux 8.3 (jessie)
  • Docker version:
Client:
 Version:      1.10.3
 API version:  1.22
 Go version:   go1.5.3
 Git commit:   20f81dd
 Built:        Thu Mar 10 15:38:58 2016
 OS/Arch:      linux/amd64
Server:
 Version:      1.10.3
 API version:  1.22
 Go version:   go1.5.3
 Git commit:   20f81dd
 Built:        Thu Mar 10 15:38:58 2016
 OS/Arch:      linux/amd64

1. Benchmark list/inspect with varying number of containers

Using benchmark.sh -c

  • Latency
    • Docker 1.9.1
      latency-varies_container
    • Docker 1.10.3
      latency-varies_container
  • CPU Usage
    • Docker 1.9.1
      cpu
    • Docker 1.10.3
      cpu

2. Benchmark list/inspect with varying operation intervals

Using benchmark.sh -i

  • ps [all=true] Latency
    • Docker 1.9.1
      latency-list_all
    • Docker 1.10.3
      latency-list_all
  • ps [all=false] Latency
    • Docker 1.9.1
      latency-list_alive
    • Docker 1.10.3
      latency-list_alive
  • inspect Latency
    • Docker 1.9.1
      latency-inspect
    • Docker 1.10.3
      latency-inspect
  • CPU Usage
    • Docker 1.9.1
      cpu
    • Docker 1.10.3
      cpu

3. Benchmark list/inspect with varying number of goroutines

Using benchmark.sh -r

  • ps [all=true] Latency
    • Docker 1.9.1
      latency-list_all
    • Docker 1.10.3
      latency-list_all
  • inspect Latency
    • Docker 1.9.1
      latency-inspect
    • Docker 1.10.3
      latency-inspect
  • CPU Usage
    • Docker 1.9.1
      cpu
    • Docker 1.10.3
      cpu

@Random-Liu
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I run the benchmark, and didn't see the issue #19720 (comment).

Since I've already run the benchmark, just post the data here, for fun. :)

@yujuhong yujuhong assigned timothysc and unassigned Random-Liu Jun 4, 2016
@yujuhong
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yujuhong commented Jun 4, 2016

Thanks @Random-Liu!

@timothysc, it seems like the issue may be specific to your test environment. I reassigned the issue to you for the followup.

@timothysc
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The BZs are up to date. We've closed 1 as an installer issue, the 2nd one, or the wedge... Is being looked into.

@idvoretskyi
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@Random-Liu awesome research, thank you.

@timothysc
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@runcom could we cross-link to the 1.10 errata once it's done, for folks who may be tracking 1.10 and kube 1.3.

@runcom
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runcom commented Jun 9, 2016

@timothysc probably @lsm5 may know how to link to errata for docker 1.10.3 issues

@goltermann
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time to close this one?

@timothysc
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I believe so, yes.

@yujuhong
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@timothysc, do we need any documentation for the v1.3 release or is that covered in other issues?

@yujuhong
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Let's use #25893 track documentation.

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