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Differential heat trees give conflicting relative abundance results

Status: Open.

#369 In grunwaldlab/metacoder;

· fionnualabulman opened on Jan 10, 2025

Package 'metacoder' has been archived on CRAN

Status: Open.

#368 In grunwaldlab/metacoder;

· willgearty opened on Dec 9, 2024

Exclude labels of lowest taxon_rank

Status: Open.

#367 In grunwaldlab/metacoder;

· fionnualabulman opened on Oct 15, 2024

Coloring of branches based on different groups (taxa detection by 12S, 16S gene regions)

Status: Open.

#366 In grunwaldlab/metacoder;

· Meng-OY opened on Sep 26, 2024

Running into error when plotting alpha diversity indexes

Status: Open.

#365 In grunwaldlab/metacoder;

· ChathuZ opened on Aug 22, 2024

Using ANCOM-BC2 for DA analysis

Status: Open.

#364 In grunwaldlab/metacoder;

· scilexenko opened on Jul 29, 2024

Error in layout$fun(graph = list(1598, TRUE, c(0, 0, 0, 0, 0, 0, 0, 0, : At rinterface_extra.c:82 : The value 10.642051692927977 is not representable as an integer. Invalid value

Status: Open.

#362 In grunwaldlab/metacoder;

· dhadsell opened on Feb 6, 2024

Phyloseq heat tree doesn't see taxon_id or supertaxon_id when trying filter_taxa?

Status: Open.

#359 In grunwaldlab/metacoder;

· hank00000 opened on Nov 4, 2023

how to get access to the Taxmap dataframe ?

Status: Open.

#358 In grunwaldlab/metacoder;

· mariabernard opened on Oct 27, 2023

Relative abundance in heat tree

Status: Open.

#357 In grunwaldlab/metacoder;

· SimonMorvan opened on Oct 25, 2023

Getting incorrectly formated results with zero_low_counts

Status: Open.

#356 In grunwaldlab/metacoder;

· dhadsell opened on Oct 24, 2023

calc_diff_abund_deseq2, linear variables and "design"?

Status: Open.

#351 In grunwaldlab/metacoder;

· msolbach opened on Aug 9, 2023