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@fmi-basel

Friedrich Miescher Institute for Biomedical Research

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  1. latent-predictive-learning latent-predictive-learning Public

    Code to accompany our paper "The combination of Hebbian and predictive plasticity learns invariant object representations in deep sensory networks” bioRxiv 2022

    Jupyter Notebook 22 5

  2. LSTree LSTree Public

    LSTree is a digital organoid and lineage tree extraction workflow for light sheet movies.

    Python 18

  3. stork stork Public

    A differentiable spiking neural network simulator

    Python 15 4

  4. neural-tangent-transfer neural-tangent-transfer Public

    Code accompanying our paper "Finding trainable sparse networks through Neural Tangent Transfer" to be published at ICML-2020.

    Jupyter Notebook 13 8

  5. glib-nature2018-materials glib-nature2018-materials Public

    Image Processing Package for the Paper "Self-organization and symmetry breaking in intestinal organoid development"

    11 3

  6. RDCNet RDCNet Public

    Recurrent Dilated Convolutional Network

    Python 9 1

Repositories

Showing 10 of 75 repositories
  • fmi-basel/ggiorget_smFISH-Mobi-bursting’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Nov 6, 2024
  • faim-robocopy Public

    A python-based UI for robocopy

    fmi-basel/faim-robocopy’s past year of commit activity
    Python 3 MIT 0 6 0 Updated Nov 5, 2024
  • fmi-basel/faim-jetraw’s past year of commit activity
    Python 0 Apache-2.0 0 3 1 Updated Oct 28, 2024
  • gpeters-fetchNOMe Public

    R package for fetching NOMe-seq data from BAM files

    fmi-basel/gpeters-fetchNOMe’s past year of commit activity
    C++ 0 0 0 0 Updated Oct 28, 2024
  • gliberal-scMultipleX Public

    Feature extraction and linking of multiplexing data.

    fmi-basel/gliberal-scMultipleX’s past year of commit activity
    Python 8 BSD-3-Clause 0 18 1 Updated Oct 23, 2024
  • fmi-basel/gfriedri_dataset-alignment’s past year of commit activity
    Python 0 BSD-3-Clause 0 2 0 Updated Oct 8, 2024
  • fmi-basel/gfriedri-em-alignment-flows’s past year of commit activity
    Python 1 Apache-2.0 0 2 0 Updated Oct 4, 2024
  • stork Public

    A differentiable spiking neural network simulator

    fmi-basel/stork’s past year of commit activity
    Python 15 MIT 4 0 0 Updated Sep 25, 2024
  • gfriedri-em-alignment Public

    Alignment tools used in the Friedrich lab.

    fmi-basel/gfriedri-em-alignment’s past year of commit activity
    Python 3 Apache-2.0 0 9 0 Updated Sep 10, 2024
  • neural-decoding-RSNN Public

    Recurrent spiking neural networks (RSNNs) for decoding of motor signals from cortical spike trains

    fmi-basel/neural-decoding-RSNN’s past year of commit activity
    Python 4 MIT 0 0 0 Updated Sep 2, 2024

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