-
Notifications
You must be signed in to change notification settings - Fork 3
New issue
Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.
By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.
Already on GitHub? Sign in to your account
Update mappings (#20) #28
Merged
Merged
Conversation
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
* Script to make four mappings: two scales (LTLA-Trust and UTLA-Trust) and two data sources (HES and linked cases-admissions) - this was previously .Rmd file. * Save resulting mappings in a single internal dataset, mappings; replaces trust_ltla_mapping and trust_utla_mapping.
* level -> map_level * source -> map_source
* add summary of making the new mapping * small edits to mapping based on SUS data * remove code chunks - this now lives in data-raw/make_mapping.R and is referenced in the vignette
* not specific to either mapping * drop details of methods (in mapping creation vignette)
Discussed changes offline with @sbfnk, merging. |
Merged
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment
Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Update LTLA- and UTLA-Trust mappings with new data.
To preserve access to the old mapping (based on SUS data until 30 September 2020), we have also changed the way that the mappings are accessed. Instead of accessing the data directly, the mappings can be accessed by
load_mapping(scale, source)
, wherescale
defines the geographical scale (either“utla”
or“ltla”
), and source defines the data source on which the mapping is based (either“sus”
for the mapping derived from Secondary Uses Service (SUS) healthcare data, or “link” for the mapping derived from linked COVID-19 cases and admissions).Both vignettes (mapping creation and mapping overview) have been updated to reflect these changes.