Additional information about the module are available at the PuckerLab website. Please feel free to reuse the materials in your courses. We would appreciate if you could acknowledge the source.
- Introduction to data literacy and plant genomics
- Sequencing technologies (Sanger, Illumina, PacBio, ONT)
- De novo genome sequence assembly and annotation
- Comparative genomics
- Data submission & publishing process
We described the technology, the recent progress in the research field and future developments in a review article: "Plant genome sequence assembly in the era of long reads: Progress, challenges and future directions"
Our protocol is freely available on protocols.io: "Plant DNA extraction and preparation for ONT sequencing".
This repository.