--- output: md_document: variant: gfm --- ```{r, echo = FALSE} knitr::opts_chunk$set( cache = TRUE, cache.path = "tools/README-cache/", collapse = TRUE, comment = "#>", fig.align = "center", fig.path = "man/figures/README-" ) ``` # pdp [![CRAN status](https://www.r-pkg.org/badges/version/investr)](https://CRAN.R-project.org/package=investr) [![R-CMD-check](https://github.com/bgreenwell/pdp/workflows/R-CMD-check/badge.svg)](https://github.com/bgreenwell/pdp/actions) [![Codecov test coverage](https://codecov.io/gh/bgreenwell/pdp/branch/master/graph/badge.svg)](https://app.codecov.io/gh/bgreenwell/pdp?branch=master) [![Total Downloads](https://cranlogs.r-pkg.org/badges/grand-total/pdp)](https://cranlogs.r-pkg.org/badges/grand-total/pdp) ## Overview [pdp](https://cran.r-project.org/package=pdp) is an R package for constructing _**p**artial **d**ependence **p**lots_ (PDPs) and _**i**ndividual **c**onditional **e**xpectation_ (ICE) curves. PDPs and ICE curves are part of a larger framework referred to as *interpretable machine learning* (IML), which also includes (but not limited to) _**v**ariable **i**mportance **p**lots_ (VIPs). While VIPs (available in the R package [vip](https://koalaverse.github.io/vip/index.html)) help visualize feature impact (either locally or globally), PDPs and ICE curves help visualize feature effects. An in-progress, but comprehensive, overview of IML can be found at the following URL: https://github.com/christophM/interpretable-ml-book. A detailed introduction to [pdp](https://cran.r-project.org/package=pdp) has been published in The R Journal: "pdp: An R Package for Constructing Partial Dependence Plots", https://journal.r-project.org/archive/2017/RJ-2017-016/index.html. You can track development at https://github.com/bgreenwell/pdp. To report bugs or issues, contact the main author directly or submit them to https://github.com/bgreenwell/pdp/issues. For additional documentation and examples, visit the [package website](https://bgreenwell.github.io/pdp/index.html). As of right now, `pdp` exports the following functions: * `partial()` - compute partial dependence functions and individual conditional expectations (i.e., objects of class `"partial"` and `"ice"`, respectively) from various fitted model objects; * `plotPartial()"` - construct `lattice`-based PDPs and ICE curves; * `autoplot()` - construct `ggplot2`-based PDPs and ICE curves; * ~~`topPredictors()` extract most "important" predictors from various types of fitted models.~~ see [vip](https://koalaverse.github.io/vip/index.html) instead for a more robust and flexible replacement; * `exemplar()` - construct an exemplar record from a data frame (**experimental** feature that may be useful for constructing fast, approximate feature effect plots.) ## Installation ```{r, eval=FALSE} # The easiest way to get pdp is to install it from CRAN: install.packages("pdp") # Alternatively, you can install the development version from GitHub: if (!("remotes" %in% installed.packages()[, "Package"])) { install.packages("remotes") } remotes::install_github("bgreenwell/pdp") ```