Skip to content
@PavlidisLab

Pavlidis lab

The Pavlidis Lab at the University of British Columbia

Pinned Loading

  1. neuroexpresso Public

    📊 Gene expression in neuroexpresso database

    R 18 1

  2. Gemma Public

    Genomics data re-analysis

    Java 23 6

  3. markerGeneProfile Public

    Marker gene profile estimation method used in NeuroExpresso manuscript

    R 14 2

Repositories

Showing 10 of 63 repositories
  • Python 0 0 0 1 Updated Feb 19, 2025
  • Gemma Public

    Genomics data re-analysis

    Java 23 Apache-2.0 6 329 30 Updated Feb 19, 2025
  • ermineR Public

    R wrapper for ermineJ

    R 6 4 3 0 Updated Feb 14, 2025
  • ermineJ Public

    Analysis of enrichment of gene sets with a GUI and CLI

    Java 0 Apache-2.0 0 2 0 Updated Feb 13, 2025
  • gemmapy Public
    Python 6 Apache-2.0 1 8 2 Updated Feb 6, 2025
  • TGEMO Public

    The Gemma Ontology

    Python 1 1 3 1 Updated Feb 3, 2025
  • TR_singlecell Public
    R 0 MIT 0 0 0 Updated Jan 28, 2025
  • ndb Public

    Web application and database providing a harmonized and comprehensive collection of genetic variants published in peer-reviewed literature.

    Java 4 Apache-2.0 0 19 (1 issue needs help) 1 Updated Dec 12, 2024
  • gemma.R Public

    An R wrapper for the Gemma RESTful API

    R 10 Apache-2.0 1 9 0 Updated Dec 11, 2024
  • pavlab-starter-parent Public

    Curated dependencies for the Pavlidis Lab's Java applications

    0 Apache-2.0 0 7 1 Updated Dec 9, 2024

Most used topics

Loading…