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Describe the bug
Running the attached pipeline (a variation of the welcome screen example pipeline) in which the entire image is masked out yields the error message below:
Failed to run module IdentifyPrimaryObjects
Traceback (most recent call last):
File "cellprofiler\gui\pipelinecontroller.py", line 3390, in do_step
File "cellprofiler_core\pipeline_pipeline.py", line 1341, in run_module
File "cellprofiler\modules\identifyprimaryobjects.py", line 1076, in run
File "cellprofiler\modules\identifyprimaryobjects.py", line 1213, in _threshold_image
File "cellprofiler\modules\threshold.py", line 879, in get_threshold
File "cellprofiler\modules\threshold.py", line 940, in get_local_threshold
File "<array_function internals>", line 180, in amin
File "numpy\core\fromnumeric.py", line 2918, in amin
File "numpy\core\fromnumeric.py", line 86, in _wrapreduction
ValueError: zero-size array to reduction operation minimum which has no identity`
Desktop (please complete the following information):
Running version 4.2.4 on windows. pipeline.zip
The text was updated successfully, but these errors were encountered:
Describe the bug
Running the attached pipeline (a variation of the welcome screen example pipeline) in which the entire image is masked out yields the error message below:
Desktop (please complete the following information):
Running version 4.2.4 on windows.
pipeline.zip
The text was updated successfully, but these errors were encountered: