Added Functionality:

(1) Ability to easily specify a database for sample submission through the Nextflow wrapper (submission_database)

(2) Pre-existing email functionality, for notifying user during a Genbank submission with genbank_submission_type set to table2asn, is now configurable within the Nextflow wrapper

• Functionality is toggled on/off with send_submission_email
• Email recipient is specified as a new field within your submission config under 'general' as 'notif_email_recipient'

(3) Git submodule integration of internal CDC submission configs with the repository

• Configs exist in a remote GitLab repository with permissions limited to CDC personnel with access to the Monkeypox group
• Documentation outlining steps on how to initialize the submodule and pull these config files from the remote location to your local version of the repo is specified within docs/cdc_configs_access.md

(4) Fully Nextflow Tower compatible

• Docker container is now hosted DockerHub and can automatically be pulled in (assuming you have the proper permissions)
• Rewriting/refactoring of the Python scripts handling database submission via FTP
• Enhancements of Nextflow wrapper structure/code to now scale across various environments

(5) Updates to README.md to include these latest changes (new/removed parameters, general restructuring etc.), as well as updates to PULL_REQUEST_TEMPLATE.md