This repository has been archived by the owner on Apr 27, 2018. It is now read-only.

Commits

Commits on May 24, 2017

Added snapxl-aligner.
Tomer Altman
committed
Fixed typos in snapxl target.
Tomer Altman
committed

Commits on Nov 4, 2015

1.0beta.22: Paired read matcher doesn't drop reads where both mates are unaligned in the input
bolosky
committed

Commits on Nov 3, 2015

1.0beta.21: Support for long contig names
bolosky
committed

Commits on Sep 21, 2015

1.0beta.20: fix infinite loop in alignment adjustment code
bolosky
committed

Commits on Aug 4, 2015

1.0beta.19: fix alloctaion bug for paired-end aligner with 64 bit indices
bolosky
committed

Commits on May 1, 2015

1.0dev.76: reduce allocation during sort phase
rnpandya
committed

Commits on Apr 30, 2015

Commits on Apr 29, 2015

Commits on Apr 13, 2015

1.0dev.74: fix bug in generating SAM flags for reads where one half of a pair is given up on for crossing a chromosome boundary
bolosky
committed

Commits on Apr 7, 2015

Commits on Apr 3, 2015

1.0dev.72: fix paired-read sorting
rnpandya
committed

Commits on Mar 23, 2015

Commits on Mar 10, 2015

Commits on Feb 26, 2015