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Transition to use contiguous data arrays #2521

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@dustinswales

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Description

Recently the GFS DDTs were modified to use contiguous data instead of blocked data NOAA-EMC/fv3atm#798.
However, not all blocked data structures were removed, most notably the restart and diagnostic types.

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Replace all blocked data references with contiguous chunked data references.

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enhancementNew feature or requestfeature-MPASLabel to identify tasks associated with the MPAS dynamical core implementation

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