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Hi. I think in the file run_fastqc.R this
if(!dir.exists("fastqc"))
should be
if(!dir.exists(paste0(destdir,"/fastqc")))
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Hi. I think in the file run_fastqc.R this
if(!dir.exists("fastqc"))
should be
if(!dir.exists(paste0(destdir,"/fastqc")))