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Commits on Sep 21, 2021

• link with zstd

  hiruna72

  committed
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Commits on Aug 20, 2021

• initial slow5 setup for indexing and call-methylation

  hiruna72

  committed
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Commits on Sep 1, 2020

• Allow users to supply htslib include path from commandline

  Chocobo1

  committed
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• Fix include path for system installed eigen library

  Chocobo1

  committed
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Commits on Aug 19, 2020

• remove hardcoded eigen version (jts#823)

  jts

  committed
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• change eigen url to gitlab (jts#823)

  jts

  committed
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Commits on Mar 15, 2020

• only build minimap2 library, not main program

  jts

  committed
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Commits on Mar 5, 2020

• update eigen (jts#738)

  jts

  committed
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• fix recursive make (jts#739)

  jts

  committed
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Commits on Mar 3, 2020

• attempt to fix ARM build

  jts

  committed
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Commits on Feb 18, 2020

• initial integration of minimap2

  jts

  committed
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Commits on Feb 14, 2020

• port refactored fast5 IO from different branch

  jts

  committed
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Commits on Jun 17, 2019

• downgrade HDF to 1.8 to avoid flock() issues reported by users

  jts

  committed
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Commits on Jun 13, 2019

• attempt to fix build by not requiring lzma for htslib

  jts

  committed
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Commits on Feb 17, 2019

• fix typo fix's typo

  jts

  committed
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• fix typo

  jts

  committed
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Commits on Jan 7, 2019

• Update default installed hdf5 version to 1.10.4.

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  Jun Aruga

  committed
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Commits on Jan 6, 2019

• Add ARM test case on Travis CI.

  

  Jun Aruga

  committed
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Commits on Jan 3, 2019

• Merge branch 'master' of https://github.com/hasindu2008/nanopolish-arm into hasindu2008-master

  jts

  committed
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Commits on Nov 2, 2018

• Merge branch 'master' of https://github.com/jts/nanopolish

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  jts

  committed
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• update makefile to fix jts#465

  jts

  committed
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Commits on Oct 21, 2018

• Merge pull request jts#466 from junaruga/feature/set-dependency-version

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  jts

  authored
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Commits on Sep 28, 2018

• Refactor Makefile to build with specified version's dependencies.

  

  Jun Aruga

  committed
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Commits on Sep 15, 2018

• Update not to run ".depend" task when running "make clean".

  

  Jun Aruga

  committed
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Commits on Sep 12, 2018

• Refactor Makefile.

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  Jun Aruga

  committed
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• Add the test case of latest version gcc 8 on Travis.

  

  Jun Aruga

  committed
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Commits on Jun 7, 2018

• comment to makefile

  hasindu2008

  committed
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Commits on Mar 2, 2018

• Merge branch 'fast5_rewrite'

  hasindu2008

  committed
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Commits on Feb 5, 2018

• fix whitespace

  jts

  committed
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• Fix building with system htslib.

  

  kjsanger

  authored and

  jts

  committed
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Commits on Dec 16, 2017

• removed unnecessary parts in scrappie to get compiled on arm

  hasindu2008

  committed
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Commits on Dec 5, 2017

• add -fsigned-char to fix ARM infinite loop (jts#285)

  jts

  committed
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Commits on Nov 10, 2017

• Improve support for using externally installed libraries

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  0xaf1f

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• Makefile: support standard compiler flags

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  0xaf1f

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Commits on Oct 20, 2017

• move pore model code to new directory

  jts

  committed
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