decentralize environments (pymc-devs#79)

* decentralize environments * decentralize environments * Fix typo per comment Co-authored-by: Ravin Kumar <ravinsdrive@gmail.com>
tristannew · Apr 13, 2020 · 416a42a · 416a42a
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diff --git a/BCM/environment.yml b/BCM/environment.yml
@@ -6,5 +6,6 @@ dependencies:
   - mkl-service
   - seaborn
   - statsmodels
+  - pip
   - pip:
      - "git+git://github.com/pymc-devs/pymc3.git@master"
diff --git a/BDA3/environment.yml b/BDA3/environment.yml
@@ -4,5 +4,6 @@ channels:
 dependencies:
   - jupyter
   - seaborn
+  - pip
   - pip:
      - "git+git://github.com/pymc-devs/pymc3.git@master"
diff --git a/BSM/README.md b/BSM/README.md
@@ -0,0 +1,30 @@
+# Bayesian Statistical Methods Python and PyMC3
+
+In this repository we port [the book's original code](https://bayessm.wordpress.ncsu.edu) to Python and PyMC3. We attempt to reproduce the examples as faithfully as possible while expressing them in a _Pythonic_ and _PyMC3onic_ way.
+
+## Display notebooks
+[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/pymc-devs/resources/master?filepath=BSM)
+[<img src="http://nbviewer.jupyter.org/static/img/nav_logo.svg" width=120>](http://nbviewer.jupyter.org/github/pymc-devs/resources/blob/master/BSM)
+
+## Contributing
+
+All contributions are welcome!
+
+Feel free to send a PR to fix errors, improve the code, or make comments that could help users of this repository and readers of the book.
+
+
+## Installing the dependencies
+
+To install the dependencies to run these notebooks, you can use [Anaconda](https://www.continuum.io/downloads). Once you have installed Anaconda, run:
+
+    conda env create -f environment.yml
+
+to install all the dependencies into an isolated environment. 
+
+Activate the environment by running:
+
+    source activate bsm-pymc3
+
+---
+
+<a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/88x31.png" /></a><br /><span>Statistical Rethinking with Python and PyMC3</span> by <a xmlns:cc="http://creativecommons.org/ns#" href="https://github.com/aloctavodia/Statistical-Rethinking-with-Python-and-PyMC3/graphs/contributors" property="cc:attributionName" rel="cc:attributionURL">All Contributors</a> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>.
diff --git a/environment.yml → BSM/environment.yml b/environment.yml → BSM/environment.yml
@@ -1,9 +1,10 @@
-name: pymc3_resources
+name: bsm-pymc3
 channels:
 - defaults
 dependencies:
   - jupyter
-  - seaborn
-  - statsmodels
+  - mkl-service
+  - pip
   - pip:
+     - "git+git://github.com/arviz-devs/arviz.git@master"
      - "git+git://github.com/pymc-devs/pymc3.git@master"
diff --git a/README.md b/README.md
@@ -1,5 +1,5 @@
 # PyMC3 Resources
-PyMC3 educational resources, including PyMC3 port of books (original models in STAN/BUGS/JAGS etc,.), PyMC3 talk slides, case studies, and other resources.
+PyMC3 educational resources, including the PyMC3 port of the following books (original models in STAN/BUGS/JAGS etc,.):
 
 -  [PyMC3 port of the book "Statistical Rethinking" by Richard McElreath (first edition)](https://github.com/pymc-devs/resources/tree/master/Rethinking)
 -  [PyMC3 port of the book "Statistical Rethinking" by Richard McElreath (second edition)](https://github.com/pymc-devs/resources/tree/master/Rethinking_2)

diff --git a/Rethinking/environment.yml b/Rethinking/environment.yml
@@ -6,6 +6,7 @@ dependencies:
   - mkl-service
   - seaborn
   - statsmodels
+  - pip
   - pip:
      - "git+git://github.com/arviz-devs/arviz.git@master"
      - "git+git://github.com/pymc-devs/pymc3.git@master"
diff --git a/Rethinking_2/README.md b/Rethinking_2/README.md
@@ -0,0 +1,34 @@
+# Statistical Rethinking (second edition) with Python and PyMC3
+
+[Statistical Rethinking](http://xcelab.net/rm/statistical-rethinking/) is an incredible introductory book to Bayesian Statistics. It follows a [_Jaynesian_](https://en.wikipedia.org/wiki/Edwin_Thompson_Jaynes) and practical approach with very good examples and clear explanations.
+
+In this repository we port [the book's original code in R and Stan](https://github.com/rmcelreath/rethinking) to Python and PyMC3. We attempt to reproduce the examples as faithfully as possible while expressing them in a _Pythonic_ and _PyMC3onic_ way.
+
+## Display notebooks
+[![Binder](https://mybinder.org/badge.svg)](https://mybinder.org/v2/gh/pymc-devs/resources/master?filepath=Rethinking_2)
+[<img src="http://nbviewer.jupyter.org/static/img/nav_logo.svg" width=120>](http://nbviewer.jupyter.org/github/pymc-devs/resources/blob/master/Rethinking_2)
+
+
+## Contributing
+
+All contributions are welcome!
+
+Feel free to send PR to fix errors, improve the code, or make comments that could help users of this repository and readers of the book.
+
+You can also join the discussion on [Gitter](https://gitter.im/Statistical-Rethinking-with-Python-and-PyMC3/Lobby).
+
+## Installing the dependencies
+
+To install the dependencies to run these notebooks, you can use [Anaconda](https://www.continuum.io/downloads). Once you have installed Anaconda, run:
+
+    conda env create -f environment.yml
+
+to install all the dependencies into an isolated environment. 
+
+Activate the environment by running:
+
+    source activate stat-rethink2-pymc3
+
+---
+
+<a rel="license" href="http://creativecommons.org/licenses/by/4.0/"><img alt="Creative Commons License" style="border-width:0" src="https://i.creativecommons.org/l/by/4.0/88x31.png" /></a><br /><span>Statistical Rethinking with Python and PyMC3</span> by <a xmlns:cc="http://creativecommons.org/ns#" href="https://github.com/aloctavodia/Statistical-Rethinking-with-Python-and-PyMC3/graphs/contributors" property="cc:attributionName" rel="cc:attributionURL">All Contributors</a> is licensed under a <a rel="license" href="http://creativecommons.org/licenses/by/4.0/">Creative Commons Attribution 4.0 International License</a>.
diff --git a/Rethinking_2/environment.yml b/Rethinking_2/environment.yml
@@ -0,0 +1,11 @@
+name: stat-rethink2-pymc3
+channels:
+- defaults
+dependencies:
+  - jupyter
+  - mkl-service
+  - pip
+  - pip:
+     - watermark
+     - "git+git://github.com/arviz-devs/arviz.git@master"
+     - "git+git://github.com/pymc-devs/pymc3.git@master"
-Original file line number
+Diff line change
@@ Expand Up / @@ -4,5 +4,6 @@ channels: @@
     dependencies:
       - jupyter
       - seaborn
+      - pip
       - pip:
          - "git+git://github.com/pymc-devs/pymc3.git@master"