Hybridization detection using phylogenetic invariants

DFOIL: Introgression Testing for Five Taxa

Visualing species tree from ASTRAL with gene tree discordance

Detects Outliers and plots genomic clines from BGC output, and extends the plotting functionality of INTROGRESS to Correlate genomic clines and hybrid indices with Environmental Variables

Hybridization Detection with Convolutional Neural Networks

Hybrid discretisation methods in Julia (VEM, HDG, HHO, etc) 🚧 🚧 🚧 Work in progress 🚧 🚧🚧

Visualization of Hybrid Organic compounds with graphs

Hybridization approach for time-series forecasting

Suitable Finite Element methods for Porous Media flow using Firedrake Project framework

Python script to generate .snp and .ind Eigenstrat files from a PHYLIP infile

Code used to analyse WGS data of giraffe in Coimbra et al. 2023

All scripts and pipelines related to inferring ploidy, hybridization and MAT locus architecture in the lichen symbionts from the genus Letharia

Hybridization Models Maximum Likelihood Estimator

This repository contains all data and scripts used to analyze reproductive isolation barriers for the "Testing the predictions of reinforcement: long-term empirical data from a damselfly mottled hybrid zone" manuscript.

Tutorial, code, and data for Evolution 2017

Python script to add population identifiers to STRUCTURE, PLINK, and PHYLIP files

The LaTeX source for my PhD Thesis, the viva for which took place in September, 2016.

Back up for the review and scripts used in the article "The evolutionary outcomes of climate-change-induced hybridization in insect populations." published in COIS,

Code to accompany Pinsky et al. 2023 Coral Reef Population Genomics in an Age of Global Change. Annual Review of Genetics

This repository contains raw data and scripts for the "Interspecific hybridization in insects in times of climate change" book chapter included in the book "Effects of Climate Change on Insects" by González-Tokman and Dáttilo.