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@saalfeldlab

Saalfeld Lab

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  1. n5 n5 Public

    Not HDF5

    Java 159 22

  2. paintera paintera Public

    Java 100 17

  3. stitching-spark stitching-spark Public

    Reconstruct big images from overlapping tiled images on a Spark cluster.

    Java 34 9

  4. render render Public

    Render transformed image tiles

    Java 33 32

  5. bigwarp bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    Java 25 14

  6. n5-viewer n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    Java 17 10

Repositories

Showing 10 of 105 repositories
  • diffusion-experiments Public
    saalfeldlab/diffusion-experiments’s past year of commit activity
    Python 0 0 0 0 Updated Oct 14, 2024
  • render Public

    Render transformed image tiles

    saalfeldlab/render’s past year of commit activity
    Java 33 GPL-2.0 32 29 5 Updated Oct 12, 2024
  • n5-ij Public

    ImageJ convenience layer for N5

    saalfeldlab/n5-ij’s past year of commit activity
    Java 14 BSD-2-Clause 9 21 (1 issue needs help) 1 Updated Oct 11, 2024
  • paintera Public
    saalfeldlab/paintera’s past year of commit activity
    Java 100 GPL-2.0 17 71 (12 issues need help) 2 Updated Oct 11, 2024
  • bigwarp Public

    A tool for manual pointwise deformable registration using bigdataviewer.

    saalfeldlab/bigwarp’s past year of commit activity
    Java 25 GPL-2.0 14 38 3 Updated Oct 11, 2024
  • cellmap-utils-kit Public

    Collection of various utilities for cellmap data including data preparation scripts, functions to extract info from attributes etc

    saalfeldlab/cellmap-utils-kit’s past year of commit activity
    Python 0 MIT 0 2 4 Updated Oct 10, 2024
  • n5-viewer Public

    BigDataViewer-based tool for visualizing multichannel multiscale N5 datasets.

    saalfeldlab/n5-viewer’s past year of commit activity
    Java 17 GPL-3.0 10 8 2 Updated Oct 8, 2024
  • imglib2-label-multisets Public

    Implementation of label multisets as an ImgLib2 native type.

    saalfeldlab/imglib2-label-multisets’s past year of commit activity
    Java 0 BSD-2-Clause 2 5 0 Updated Oct 3, 2024
  • n5-universe Public

    Functionality shared across all n5

    saalfeldlab/n5-universe’s past year of commit activity
    Java 1 BSD-2-Clause 2 7 1 Updated Oct 2, 2024
  • n5-api-saving Public

    Shared resources for writing data and metadata with the n5-api

    saalfeldlab/n5-api-saving’s past year of commit activity
    Java 0 BSD-2-Clause 0 3 0 Updated Oct 2, 2024
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