Add this suggestion to a batch that can be applied as a single commit.
This suggestion is invalid because no changes were made to the code.
Suggestions cannot be applied while the pull request is closed.
Suggestions cannot be applied while viewing a subset of changes.
Only one suggestion per line can be applied in a batch.
Add this suggestion to a batch that can be applied as a single commit.
Applying suggestions on deleted lines is not supported.
You must change the existing code in this line in order to create a valid suggestion.
Outdated suggestions cannot be applied.
This suggestion has been applied or marked resolved.
Suggestions cannot be applied from pending reviews.
Suggestions cannot be applied on multi-line comments.
Suggestions cannot be applied while the pull request is queued to merge.
Suggestion cannot be applied right now. Please check back later.
Support for k-mers up to 128.
Currently it is about 4 times slower for k-mers >64 than for k-mers up to 64.
My guess that the additional 2 times slowdown (2 times slower is required as software implementation of the type) comes from additional operations needed to compute hashes etc.
I.g. this could be optimized but i don't think it's a priority. Even the fact that those k are supported and they are not terribly slow should be an advantage.
Currently the only downside to this PR is rouhgly 2 times slowdown of compilation. I'll see what can be done with it.
EDIT: the compilation now takes about 3sec on my PC which i.g. should be okay.