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OpenRefine-ecology

Lesson on OpenRefine for ecology

Data set notes.

  • This data set is derived from [The Portal Project Long-term desert ecology] (http://portal.weecology.org/) data. It was downloaded and then modified specifically for use with Open Refine.
  • Taxon names were put back into the file.
  • Globally Unique Identifiers (in the form of UUIDs) were added.
  • These modifications were made in order to illustrate some features of Open Refine.
  • using clustering algorithms on the taxon names column, shows the power of the algorithms to find discrepancies quickly and make it simple to fix all issues found, very quickly.
  • using UUIDs highlights the importance of being able to merge many data sets together without the possibility to garble data.
  • Known errors in the taxon names were added, again to show off what Open Refine can do.
  • Also, we have done a version where we introduce a duplicate UUID - to highlight the importance of checking for uniqueness.

Options.

  • For someone already familiar with Open Refine, it would be a very simple matter to substitute a different data set, as desired.

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