R package to install, manage and run Pandoc (https://pandoc.org/)

An R modeling language for convex optimization problems.

A (very) short introduction to R

mfair: Matrix Factorization with Auxiliary Information in R

Survival package for R

Information about 277 dog breeds extracted from the American Kennel Club website using Beautiful Soup.

GitHub Actions for developing and maintaining Bioconductor packages

Empirical Bayes Poisson Matrix Factorization

package for the causal TWAS project

Curriculum for full year upperclass ML/AI course

R package for computation of (adjusted) rand-index and other such scores

Meta-programming R package for computing the derivative of simple functions.

GWAS for survival analysis in large cohorts

a github repository for the pcb seminar introducing Docker

R package for generalized binary covariance decomposition.

an attempt to mitigate susie coverage in small sample size

Fast algorithms for GLM-PCA.

Analysis of single-cell RNA-seq data using topic models.

Age-dependent topic modelling

Spatially aware dimension reduction for spatial transcriptomics.

An R package for conducting all sorts of R piratery

Code and example data for running Consensus Non-negative Matrix Factorization on single-cell RNA-Seq data

Variance stabilizing transformation for Gamma Poisson distributed data

Replication materials for "ebnm: an R package for solving the empirical Bayes normal means problem using a variety of prior families"

A faster and angrier package for EBMF.

Perform factor analysis in high dimensional correlated data

Friends don't let friends make certain types of data visualization - What are they and why are they bad.

Repo for May 22, 2021 BSD beginning SWC workshop