diff --git a/bioblend_histories.ipynb b/bioblend_histories.ipynb index b846b8c..8d92fd0 100644 --- a/bioblend_histories.ipynb +++ b/bioblend_histories.ipynb @@ -198,7 +198,6 @@ " u'importable': False,\n", " u'model_class': u'History',\n", " u'name': u'Unnamed history',\n", - " u'nice_size': u'78.9 KB',\n", " u'published': False,\n", " u'purged': False,\n", " u'size': 80839,\n", @@ -342,6 +341,7 @@ " u'annotation': None,\n", " u'api_type': u'file',\n", " u'create_time': u'2015-06-23T14:35:29.832099',\n", + " u'creating_job': u'95f9b8054e5659b0',\n", " u'data_type': u'galaxy.datatypes.sequence.FastqSanger',\n", " u'dataset_id': u'bbd44e69cb8906b58136996268e6636d',\n", " u'deleted': False,\n", @@ -366,8 +366,8 @@ " u'model_class': u'HistoryDatasetAssociation',\n", " u'name': u'bwa-mem-fastq1.fq',\n", " u'peek': u'
@M01368:8:000000000-A3GHV:1:1101:6911:8255/1
ATCTGGTTCCTACTTCAGGGCCATAAAACCTAAATAGCCCACACGTTCCCCTTAAATAAGACATCACGATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTCTGGGGGGTGTGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT
+
BCCCCFFFFFFFGGGGGGGGGGGHHHHGHGHHHHHHHHHGGGGGGHHHHGHHHHHHHHHHGHHHHHHGGHGGHHHGHHHHFHHGHHHHHHHHHGHEHEFFGHHEGGCEFGGFHHHBGHHGHHHHGHFHHHGHGHGHGGCDFDDACGGGGGGGAAFFFFFFFFFBAFFFFFB;FFFFFFADDFFFFFFFFFFEFFFFFFFFFFBFFFFFFFFFFFFFFEFFFFFFFFBFEFFFFEFE;DFFFDFBFF/9BFB
@M01368:8:000000000-A3GHV:1:1101:14518:9998/1
GTTATTATTATGTCCTACAAGCATTAATTAATTAACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGGGATAGACCTGTGATCCATCGTGAT
',\n", - " u'permissions': {},\n", " u'purged': False,\n", + " u'rerunnable': False,\n", " u'resubmitted': False,\n", " u'state': u'ok',\n", " u'tags': [],\n", @@ -377,7 +377,14 @@ " u'url': u'/api/histories/153e591de2140b59/contents/bbd44e69cb8906b58bced975c2813624',\n", " u'uuid': u'b7f0a37f-0134-4925-83ce-2bef7f394ce6',\n", " u'visible': True,\n", - " u'visualizations': []}" + " u'visualizations': [{u'embeddable': False,\n", + " u'href': u'/plugins/visualizations/graphviz/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n", + " u'html': u'Graph Visualization',\n", + " u'target': u'galaxy_main'},\n", + " {u'embeddable': False,\n", + " u'href': u'/plugins/interactive_environments/jupyter/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n", + " u'html': u'Jupyter (Programming Environment)',\n", + " u'target': u'galaxy_main'}]}" ] }, "execution_count": 21, @@ -412,6 +419,7 @@ " u'annotation': None,\n", " u'api_type': u'file',\n", " u'create_time': u'2015-06-23T14:35:29.832099',\n", + " u'creating_job': u'95f9b8054e5659b0',\n", " u'data_type': u'galaxy.datatypes.sequence.FastqSanger',\n", " u'dataset_id': u'bbd44e69cb8906b58136996268e6636d',\n", " u'deleted': False,\n", @@ -436,8 +444,8 @@ " u'model_class': u'HistoryDatasetAssociation',\n", " u'name': u'bwa-mem-fastq1.fq',\n", " u'peek': u'
@M01368:8:000000000-A3GHV:1:1101:6911:8255/1
ATCTGGTTCCTACTTCAGGGCCATAAAACCTAAATAGCCCACACGTTCCCCTTAAATAAGACATCACGATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTCTGGGGGGTGTGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT
+
BCCCCFFFFFFFGGGGGGGGGGGHHHHGHGHHHHHHHHHGGGGGGHHHHGHHHHHHHHHHGHHHHHHGGHGGHHHGHHHHFHHGHHHHHHHHHGHEHEFFGHHEGGCEFGGFHHHBGHHGHHHHGHFHHHGHGHGHGGCDFDDACGGGGGGGAAFFFFFFFFFBAFFFFFB;FFFFFFADDFFFFFFFFFFEFFFFFFFFFFBFFFFFFFFFFFFFFEFFFFFFFFBFEFFFFEFE;DFFFDFBFF/9BFB
@M01368:8:000000000-A3GHV:1:1101:14518:9998/1
GTTATTATTATGTCCTACAAGCATTAATTAATTAACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGGGATAGACCTGTGATCCATCGTGAT
',\n", - " u'permissions': {},\n", " u'purged': False,\n", + " u'rerunnable': False,\n", " u'resubmitted': False,\n", " u'state': u'ok',\n", " u'tags': [],\n", @@ -447,7 +455,14 @@ " u'url': u'/api/histories/153e591de2140b59/contents/bbd44e69cb8906b58bced975c2813624',\n", " u'uuid': u'b7f0a37f-0134-4925-83ce-2bef7f394ce6',\n", " u'visible': True,\n", - " u'visualizations': []}" + " u'visualizations': [{u'embeddable': False,\n", + " u'href': u'/plugins/visualizations/graphviz/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n", + " u'html': u'Graph Visualization',\n", + " u'target': u'galaxy_main'},\n", + " {u'embeddable': False,\n", + " u'href': u'/plugins/interactive_environments/jupyter/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n", + " u'html': u'Jupyter (Programming Environment)',\n", + " u'target': u'galaxy_main'}]}" ] }, "execution_count": 26, @@ -486,7 +501,6 @@ " u'importable': False,\n", " u'model_class': u'History',\n", " u'name': u'New history',\n", - " u'nice_size': u'0 bytes',\n", " u'published': False,\n", " u'purged': False,\n", " u'size': 0,\n",