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Update results for Galaxy 16.04
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@nsoranzo
nsoranzo committed Jun 22, 2016
1 parent 222e52e commit 40646c7
Showing 1 changed file with 20 additions and 6 deletions.
26 changes: 20 additions & 6 deletions bioblend_histories.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -198,7 +198,6 @@
" u'importable': False,\n",
" u'model_class': u'History',\n",
" u'name': u'Unnamed history',\n",
" u'nice_size': u'78.9 KB',\n",
" u'published': False,\n",
" u'purged': False,\n",
" u'size': 80839,\n",
Expand Down Expand Up @@ -342,6 +341,7 @@
" u'annotation': None,\n",
" u'api_type': u'file',\n",
" u'create_time': u'2015-06-23T14:35:29.832099',\n",
" u'creating_job': u'95f9b8054e5659b0',\n",
" u'data_type': u'galaxy.datatypes.sequence.FastqSanger',\n",
" u'dataset_id': u'bbd44e69cb8906b58136996268e6636d',\n",
" u'deleted': False,\n",
Expand All @@ -366,8 +366,8 @@
" u'model_class': u'HistoryDatasetAssociation',\n",
" u'name': u'bwa-mem-fastq1.fq',\n",
" u'peek': u'<table cellspacing=\"0\" cellpadding=\"3\"><tr><td>@M01368:8:000000000-A3GHV:1:1101:6911:8255/1</td></tr><tr><td>ATCTGGTTCCTACTTCAGGGCCATAAAACCTAAATAGCCCACACGTTCCCCTTAAATAAGACATCACGATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTCTGGGGGGTGTGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT</td></tr><tr><td>+</td></tr><tr><td>BCCCCFFFFFFFGGGGGGGGGGGHHHHGHGHHHHHHHHHGGGGGGHHHHGHHHHHHHHHHGHHHHHHGGHGGHHHGHHHHFHHGHHHHHHHHHGHEHEFFGHHEGGCEFGGFHHHBGHHGHHHHGHFHHHGHGHGHGGCDFDDACGGGGGGGAAFFFFFFFFFBAFFFFFB;FFFFFFADDFFFFFFFFFFEFFFFFFFFFFBFFFFFFFFFFFFFFEFFFFFFFFBFEFFFFEFE;DFFFDFBFF/9BFB</td></tr><tr><td>@M01368:8:000000000-A3GHV:1:1101:14518:9998/1</td></tr><tr><td>GTTATTATTATGTCCTACAAGCATTAATTAATTAACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGGGATAGACCTGTGATCCATCGTGAT</td></tr></table>',\n",
" u'permissions': {},\n",
" u'purged': False,\n",
" u'rerunnable': False,\n",
" u'resubmitted': False,\n",
" u'state': u'ok',\n",
" u'tags': [],\n",
Expand All @@ -377,7 +377,14 @@
" u'url': u'/api/histories/153e591de2140b59/contents/bbd44e69cb8906b58bced975c2813624',\n",
" u'uuid': u'b7f0a37f-0134-4925-83ce-2bef7f394ce6',\n",
" u'visible': True,\n",
" u'visualizations': []}"
" u'visualizations': [{u'embeddable': False,\n",
" u'href': u'/plugins/visualizations/graphviz/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n",
" u'html': u'Graph Visualization',\n",
" u'target': u'galaxy_main'},\n",
" {u'embeddable': False,\n",
" u'href': u'/plugins/interactive_environments/jupyter/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n",
" u'html': u'Jupyter (Programming Environment)',\n",
" u'target': u'galaxy_main'}]}"
]
},
"execution_count": 21,
Expand Down Expand Up @@ -412,6 +419,7 @@
" u'annotation': None,\n",
" u'api_type': u'file',\n",
" u'create_time': u'2015-06-23T14:35:29.832099',\n",
" u'creating_job': u'95f9b8054e5659b0',\n",
" u'data_type': u'galaxy.datatypes.sequence.FastqSanger',\n",
" u'dataset_id': u'bbd44e69cb8906b58136996268e6636d',\n",
" u'deleted': False,\n",
Expand All @@ -436,8 +444,8 @@
" u'model_class': u'HistoryDatasetAssociation',\n",
" u'name': u'bwa-mem-fastq1.fq',\n",
" u'peek': u'<table cellspacing=\"0\" cellpadding=\"3\"><tr><td>@M01368:8:000000000-A3GHV:1:1101:6911:8255/1</td></tr><tr><td>ATCTGGTTCCTACTTCAGGGCCATAAAACCTAAATAGCCCACACGTTCCCCTTAAATAAGACATCACGATGGATCACAGGTCTATCACCCTATTAACCACTCACGGGAGCTCTCCATGCATTTGGTATTTTCGTCTGGGGGGTGTGCACGCGATAGCATTGCGAGACGCTGGAGCCGGAGCACCCTATGTCGCAGTATCTGTCTTTGATTCCTGCCTCATCCTATTATTTATCGCACCTACGTTCAATATT</td></tr><tr><td>+</td></tr><tr><td>BCCCCFFFFFFFGGGGGGGGGGGHHHHGHGHHHHHHHHHGGGGGGHHHHGHHHHHHHHHHGHHHHHHGGHGGHHHGHHHHFHHGHHHHHHHHHGHEHEFFGHHEGGCEFGGFHHHBGHHGHHHHGHFHHHGHGHGHGGCDFDDACGGGGGGGAAFFFFFFFFFBAFFFFFB;FFFFFFADDFFFFFFFFFFEFFFFFFFFFFBFFFFFFFFFFFFFFEFFFFFFFFBFEFFFFEFE;DFFFDFBFF/9BFB</td></tr><tr><td>@M01368:8:000000000-A3GHV:1:1101:14518:9998/1</td></tr><tr><td>GTTATTATTATGTCCTACAAGCATTAATTAATTAACACACTTTAGTAAGTATGTTCGCCTGTAATATTGAACGTAGGTGCGATAAATAATAGGATGAGGCAGGAATCAAAGACAGATACTGCGACATAGGGTGCTCCGGCTCCAGCGTCTCGCAATGCTATCGCGTGCACACCCCCCAGACGAAAATACCAAATGCATGGAGAGCTCCCGTGAGTGGTTAATAGGGGGATAGACCTGTGATCCATCGTGAT</td></tr></table>',\n",
" u'permissions': {},\n",
" u'purged': False,\n",
" u'rerunnable': False,\n",
" u'resubmitted': False,\n",
" u'state': u'ok',\n",
" u'tags': [],\n",
Expand All @@ -447,7 +455,14 @@
" u'url': u'/api/histories/153e591de2140b59/contents/bbd44e69cb8906b58bced975c2813624',\n",
" u'uuid': u'b7f0a37f-0134-4925-83ce-2bef7f394ce6',\n",
" u'visible': True,\n",
" u'visualizations': []}"
" u'visualizations': [{u'embeddable': False,\n",
" u'href': u'/plugins/visualizations/graphviz/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n",
" u'html': u'Graph Visualization',\n",
" u'target': u'galaxy_main'},\n",
" {u'embeddable': False,\n",
" u'href': u'/plugins/interactive_environments/jupyter/show?dataset_id=bbd44e69cb8906b58bced975c2813624',\n",
" u'html': u'Jupyter (Programming Environment)',\n",
" u'target': u'galaxy_main'}]}"
]
},
"execution_count": 26,
Expand Down Expand Up @@ -486,7 +501,6 @@
" u'importable': False,\n",
" u'model_class': u'History',\n",
" u'name': u'New history',\n",
" u'nice_size': u'0 bytes',\n",
" u'published': False,\n",
" u'purged': False,\n",
" u'size': 0,\n",
Expand Down

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