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.gitignore
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# Always present status files
/check-docker-daemon-running
status_code
# Generated files
/check-for-docker-credentials
/data-loaded-image-1
/data-loaded-image-2
/data-loaded-image-1small
/data-loaded-image-1and2
/development-image
dist/**
__pycache__/
.current_time.txt
/.dockerignore
.initiation_message_size
/.initial_time.txt
*.pyc
/Dockerfile
**.whl
build/*/docker.built
build/plugins/**/*.built
build/*/requirements.txt
build/*/specific_requirements.txt
build/*/dlogs.*.txt
build/countsserver/expression_data/
build/db/schema.sql
build/db/initialize_schema.sql
build/*.whl
build/lib/
build/apiserver/log_of_build.log
build/graphs/log_of_build.log
build/db/log_of_build.log
build/ondemand/log_of_build.log
build/workflow/log_of_build.log
check-dockerfiles-consistency
data-loaded-image-1smallnointensity
development-image-prerequisites-installed
log_of_build.log
pyproject.toml
spatialprofilingtoolbox.egg-info/
test/workflow/.nextflow/
test/workflow/results/
test/workflow/work/
test/workflow/plots.html
test/workflow/nf_files/
*.svg
*.pickle
data_curation/datasets/moldoveanu/CP_output_tiff/
data_curation/datasets/moldoveanu/Moldoveanu2022-cytof-RAW.tar
data_curation/datasets/moldoveanu/Moldoveanu2022-cytof-RAW.tar.gz
data_curation/datasets/moldoveanu/sciimmunol.abi5072_tables_s1 to_s5.xlsx
data_curation/datasets/moldoveanu/sciimmunol.abi5072_tables_s1 to_s5.zip
# Development files
.vscode/
.mypy_cache/
venv/
.venv/