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Update SSSOM Extended Prefix Map (#530)
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This pull request updates sssom extended prefix map (epm). Make sure you
run make tests manually.

Co-authored-by: matentzn <matentzn@users.noreply.github.com>
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github-actions[bot] and matentzn authored May 13, 2024
1 parent 4284d52 commit 806ca86
Showing 1 changed file with 28 additions and 12 deletions.
40 changes: 28 additions & 12 deletions src/sssom/obo.epm.json
Original file line number Diff line number Diff line change
Expand Up @@ -262,6 +262,20 @@
"https://purl.obolibrary.org/obo/ATO_"
]
},
{
"prefix": "AfPO",
"prefix_synonyms": [
"afpo"
],
"uri_prefix": "http://purl.obolibrary.org/obo/AfPO_",
"uri_prefix_synonyms": [
"http://bioregistry.io/AfPO:",
"http://bioregistry.io/afpo:",
"https://bioregistry.io/AfPO:",
"https://bioregistry.io/afpo:",
"https://purl.obolibrary.org/obo/AfPO_"
]
},
{
"pattern": "^\\d{7}$",
"prefix": "BCGO",
Expand Down Expand Up @@ -9957,10 +9971,10 @@
},
{
"prefix": "cls",
"uri_prefix": "https://cls.shop/",
"uri_prefix": "https://www.cytion.com/",
"uri_prefix_synonyms": [
"http://bioregistry.io/cls:",
"http://cls.shop/",
"http://www.cytion.com/",
"https://bioregistry.io/cls:"
]
},
Expand Down Expand Up @@ -11732,11 +11746,11 @@
"uri_prefix_synonyms": [
"http://bioregistry.io/DSMZCellDive:",
"http://bioregistry.io/dsmz:",
"http://celldive.dsmz.de/cellline/",
"http://celldive.dsmz.de/celllines/",
"http://www.dsmz.de/collection/catalogue/details/culture/",
"https://bioregistry.io/DSMZCellDive:",
"https://bioregistry.io/dsmz:",
"https://celldive.dsmz.de/cellline/"
"https://celldive.dsmz.de/celllines/"
]
},
{
Expand Down Expand Up @@ -11802,8 +11816,10 @@
"uri_prefix": "https://www.phe-culturecollections.org.uk/products/celllines/generalcell/detail.jsp?collection=ecacc_gc&refId=",
"uri_prefix_synonyms": [
"http://bioregistry.io/ecacc:",
"http://www.culturecollections.org.uk/products/celllines/detail.jsp?refId=",
"http://www.phe-culturecollections.org.uk/products/celllines/generalcell/detail.jsp?collection=ecacc_gc&refId=",
"https://bioregistry.io/ecacc:"
"https://bioregistry.io/ecacc:",
"https://www.culturecollections.org.uk/products/celllines/detail.jsp?refId="
]
},
{
Expand Down Expand Up @@ -12524,10 +12540,8 @@
"uri_prefix": "https://www.ebi.ac.uk/cgi-bin/ipd/estdab/print_cell.cgi?ESTDAB-",
"uri_prefix_synonyms": [
"http://bioregistry.io/estdab:",
"http://www.ebi.ac.uk/cgi-bin/ipd/estdab/print_cell.cgi?",
"http://www.ebi.ac.uk/cgi-bin/ipd/estdab/print_cell.cgi?ESTDAB-",
"https://bioregistry.io/estdab:",
"https://www.ebi.ac.uk/cgi-bin/ipd/estdab/print_cell.cgi?"
"https://bioregistry.io/estdab:"
]
},
{
Expand Down Expand Up @@ -19792,12 +19806,14 @@
"http://n2t.net/omia:",
"http://omia.angis.org.au/retrieve.shtml?pid=",
"http://omia.org/OMIA",
"http://www.omia.org/OMIA",
"https://bio2rdf.org/omia:",
"https://bioregistry.io/omia:",
"https://identifiers.org/omia/",
"https://identifiers.org/omia:",
"https://n2t.net/omia:",
"https://omia.angis.org.au/retrieve.shtml?pid="
"https://omia.angis.org.au/retrieve.shtml?pid=",
"https://www.omia.org/OMIA"
]
},
{
Expand Down Expand Up @@ -20079,20 +20095,20 @@
"http://identifiers.org/orphanet:",
"http://n2t.net/orphanet:",
"http://orphanet.bio2rdf.org/describe/?url=http://bio2rdf.org/orphanet:",
"http://www.orpha.net/consor/cgi-bin//OC_Exp.php?lng=EN&Expert=",
"http://www.orpha.net/consor/cgi-bin/OC_Exp.php?Lng=GB&Expert=",
"http://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=EN&Expert=",
"http://www.orpha.net/en/disease/detail/",
"https://bio2rdf.org/orphanet:",
"https://bioregistry.io/ORPHA:",
"https://bioregistry.io/orphanet:",
"https://identifiers.org/orphanet/",
"https://identifiers.org/orphanet:",
"https://n2t.net/orphanet:",
"https://orphanet.bio2rdf.org/describe/?url=http://bio2rdf.org/orphanet:",
"https://www.orpha.net/consor/cgi-bin//OC_Exp.php?lng=EN&Expert=",
"https://www.orpha.net/consor/cgi-bin/OC_Exp.php?Lng=EN&Expert=",
"https://www.orpha.net/consor/cgi-bin/OC_Exp.php?Lng=GB&Expert=",
"https://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=EN&Expert="
"https://www.orpha.net/consor/cgi-bin/OC_Exp.php?lng=EN&Expert=",
"https://www.orpha.net/en/disease/detail/"
]
},
{
Expand Down

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