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17 Open 32 Closed
17 Open 32 Closed
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Issues list

The Alphafold2 class does not have the parameter XXX.
#110 opened Oct 12, 2024 by nibingwei123
How to adjust the recycling times in model?
#109 opened May 15, 2023 by Syaoran036
read me dimensions are off. Example to run alpha fold 2 msa, and seq lengths should be the same. One is 128, the other is 120.
#104 opened Oct 25, 2021 by ofTarradiddle
How can I get the coordinates of all the atoms?
#103 opened Oct 13, 2021 by RayTang88
outerMean module question
#102 opened Oct 9, 2021 by ifromeast
1
__init__() got an unexpected keyword argument 'structure_module_type'
#101 opened Sep 24, 2021 by ifromeast
4
Can AlphaFold2 predict the structure of cyclic peptides?
#98 opened Sep 8, 2021 by JustinDoIt
1
[todo] ensembling
#97 opened Aug 25, 2021 by lucidrains
[todo] structure module enhancement New feature or request
#93 opened Jul 26, 2021 by lucidrains
3
TypeError: __init__() got an unexpected keyword argument 'num_backbone_atoms'
#87 opened Jul 24, 2021 by jackli777
3
[todo] checkpointing enhancement New feature or request
#81 opened Jul 20, 2021 by lucidrains
3
[todo] BERT loss on MSA enhancement New feature or request
#80 opened Jul 20, 2021 by lucidrains
4
problem with alphafold2/train_pre.py
#76 opened Jul 20, 2021 by jackli777
Basic pretrained models + quickstart instructions?
#61 opened Apr 13, 2021 by TylerBalsam
1
Add PL Lightning to Enable Distributed Training and Deep Speed
#59 opened Apr 5, 2021 by aribornstein
3
MSA tensor format
#56 opened Mar 31, 2021 by panganqi
5
the sidechainnet pkg updates, the load function doesnot has parameter return_masks and the format of casp12 data from scn has changed, which is not compatible with train_end2end.py
#51 opened Mar 17, 2021 by ditannan
1
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