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Plans to add an API

enhancementNew feature or requestNew feature or request

Status: Open.

#69 In lh3/miniprot;

· gtonkinhill opened on Dec 4, 2024

[morecore] insufficient memory

Status: Open.

#68 In lh3/miniprot;

· HHaoyi opened on Nov 13, 2024

Feature Request: --junc-bed, --junc-bonus parameters

enhancementNew feature or requestNew feature or request

Status: Open.

#65 In lh3/miniprot;

· alevar opened on Oct 7, 2024

Can this be used as a replacement for MetaEuk's eukaryotic gene prediction capabilities?

questionFurther information is requestedFurther information is requested

Status: Open.

#64 In lh3/miniprot;

· jolespin opened on Sep 29, 2024

Use information from conserved introns

enhancementNew feature or requestNew feature or request

Status: Open.

#60 In lh3/miniprot;

· mparker2 opened on Mar 18, 2024

large chromosome alignment may have empty output

bugSomething isn't workingSomething isn't working

Status: Open.

#59 In lh3/miniprot;

· huangnengCSU opened on Mar 7, 2024

Using miniprot to identify homologous transposable elements?

Status: Open.

#52 In lh3/miniprot;

· BitaoQiu opened on Nov 25, 2023

Internal stop codons

Status: Open.

#41 In lh3/miniprot;

· KhadkaBijen opened on Apr 22, 2023

duplicate and close variants of the same alignment in the output

enhancementNew feature or requestNew feature or request

questionFurther information is requestedFurther information is requested

Status: Open.

#37 In lh3/miniprot;

· azat-badretdin opened on Mar 29, 2023

Chimeric alignments spanning multiple adjacent genes

Status: Open.

#35 In lh3/miniprot;

· vkkodali opened on Mar 14, 2023

Negative length for introns in cs:Z: tag

Status: Open.

#34 In lh3/miniprot;

· vkkodali opened on Mar 10, 2023

How to achieve higher sensitivity?

Status: Open.

#30 In lh3/miniprot;

· zhaijj opened on Feb 10, 2023