From 9b0ff2418c298f5b5d0df12b137896e5c3fb0ef4 Mon Sep 17 00:00:00 2001
From: kojix2 <2xijok@gmail.com>
Date: Thu, 14 Mar 2024 11:15:46 +0900
Subject: [PATCH] Fix mm_mapopt_t in Mappy (#1177)

Add transition. Related to #1069
---
 python/cmappy.pxd | 1 +
 1 file changed, 1 insertion(+)

diff --git a/python/cmappy.pxd b/python/cmappy.pxd
index c208c4c3..47855feb 100644
--- a/python/cmappy.pxd
+++ b/python/cmappy.pxd
@@ -36,6 +36,7 @@ cdef extern from "minimap.h":
 		float alt_drop
 
 		int a, b, q, e, q2, e2
+		int transition
 		int sc_ambi
 		int noncan
 		int junc_bonus