Skip to content

Commit

Permalink
Major rework to improve code quality and add automation checks (TheAl…
Browse files Browse the repository at this point in the history
…gorithms#805)

* delete secant method - it is identical to regula falsi

* document + improvize root finding algorithms

* attempt to document gaussian elimination

* added file brief

* commented doxygen-mainpage, added files-list link

* corrected files list link path

* files-list link correction - this time works :)

* document successive approximations

* cleaner equation

* updating DIRECTORY.md

* documented kmp string search

* document brute force string search

* document rabin-karp string search

* fixed mainpage readme

* doxygen v1.8.18 will suppress out the #minipage in the markdown

* cpplint correction for header guard style

* github action to auto format source code per cpplint standard

* updated setting to add 1 space before `private` and `public` keywords

* auto rename files and auto format code

* added missing "run" for step

* corrected asignmemt operation

* fixed trim and assign syntax

* added git move for renaming bad filenames

* added missing pipe for trim

* added missing space

* use old and new fnames

* store old fname using echo

* move files only if there is a change in filename

* put old filenames in quotes

* use double quote for old filename

* escape double quotes

* remove old_fname

* try escape characters and echo"

* add file-type to find

* cleanup echo

* ensure all trim variables are also in quotes

* try escape -quote again

* remove second escpe quote

* use single quote for first check

* use carets instead of quotes

* put variables in brackets

* remove -e from echo

* add debug echos

* try print0 flag

* find command with while instead of for-loop

* find command using IFS instead

* 🎉 IFS fix worked - escaped quotes for git mv

* protetc each word in git mv ..

* filename exists in lower cases - renamed

* 🎉 git push enabled

* updating DIRECTORY.md

* git pull & then push

* formatting filenames d7af6fd

* formatting source-code for d7af6fd

* remove allman break before braces

* updating DIRECTORY.md

* added missing comma lost in previous commit

* orchestrate all workflows

* fix yml indentation

* force push format changes, add title to DIRECTORY.md

* pull before proceeding

* reorganize pull commands

* use master branches for actions

* rename .cc files to .cpp

* added class destructor to clean up dynamic memory allocation

* rename to awesome workflow

* commented whole repo cpplint - added modified files lint check

* removed need for cpplint

* attempt to use actions/checkout@master

* temporary: no dependency on cpplint

* formatting filenames 153fb7b

* formatting source-code for 153fb7b

* updating DIRECTORY.md

* fix diff filename

* added comments to the code

* added test case

* formatting source-code for a850308

* updating DIRECTORY.md

* added machine learning folder

* added adaline algorithm

* updating DIRECTORY.md

* fixed issue [LWG2192](https://cplusplus.github.io/LWG/issue2192) for std::abs on MacOS

* add cmath for same bug: [LWG2192](https://cplusplus.github.io/LWG/issue2192) for std::abs on MacOS

* formatting source-code for f8925e4

* use STL's inner_product

* formatting source-code for f94a330

* added range comments

* define activation function

* use equal initial weights

* change test2 function to predict

* activation function not friend

* previous commit correction

* added option for predict function to return value before applying activation function as optional argument

* added test case to classify points lying within a sphere

* improve documentation for adaline

* formatting source-code for 15ec4c3

* added cmake to geometry folder

* added algorithm include for std::max

* add namespace - machine_learning

* add namespace - statistics

* add namespace - sorting

* added sorting algos to namespace sorting

* added namespace string_search

* formatting source-code for fd69530

* added documentation to string_search namespace

* feat: Add BFS and DFS algorithms to check for cycle in a directed graph

* Remove const references for input of simple types

Reason: overhead on access

* fix bad code

sorry for force push

* Use pointer instead of the non-const reference

because apparently google says so.

* Remove a useless and possibly bad Graph constuctor overload

* Explicitely specify type of vector during graph instantiation

* updating DIRECTORY.md

* find openMP before adding subdirectories

* added kohonen self organizing map

* updating DIRECTORY.md

* remove older files and folders from gh-pages before adding new files

* remove chronos library due to inacceptability by cpplint

* use c++ specific static_cast instead

* initialize radom number generator

* updated image links with those from CPP repository

* rename computer.... folder to numerical methods

* added durand kerner method for root computation for arbitrarily large polynomials

* fixed additional comma

* fix cpplint errors

* updating DIRECTORY.md

* convert to function module

* update documentation

* move openmp to main loop

* added two test cases

* use INT16_MAX

* remove return statement from omp-for loop and use "break"

* run tests when no input is provided and skip tests when input polynomial is provided

* while loop cannot have break - replaced with continue and check is present in the main while condition

* (1) break while loop (2) skip runs on break_loop instead of hard-break

* add documentation images

* use long double for errors and tolerance checks

* make iterator variable i local to threads

* add critical secions to omp threads

* bugfix: move file writing outside of the parallel loop
othersie, there is no gurantee of the order of roots written to file

* rename folder to data_structures

* updating DIRECTORY.md

* fix ambiguous symbol `size`

* add data_structures to cmake

* docs: enable tree view, add timestamp in footer, try clang assistaed parsing

* doxygen - open links in external window

* remove invalid parameter from function docs

* use HTML5 img tag to resize images

* move file to proper folder

* fix documentations and cpplint

* formatting source-code for aacaf98

* updating DIRECTORY.md

* cpplint: add braces for multiple statement if

* add explicit link to badges

* remove  duplicate line

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* remove namespace indentation

* remove file associations in settings

* add author name

* enable cmake in subfolders of data_structures

* create and link object file

* cpp lint fixes and instantiate template classes

* cpp lint fixes and instantiate template classes

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* cpplint - ignore `build/include`

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* disable redundant gcc compilation in cpplint workflow

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* template header files contain function codes as well and removed redundant subfolders

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* updating DIRECTORY.md

* remove semicolons after functions in a class

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* cpplint header guard style

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* remove semilon

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* added LU decomposition algorithm

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* added QR decomposition algorithm

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* use QR decomposition to find eigen values

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* updating DIRECTORY.md

* use std::rand for thread safety

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* move srand to main()

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* cpplint braces correction

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* updated eigen value documentation

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* fix matrix shift doc

Signed-off-by: Krishna Vedala <7001608+kvedala@users.noreply.github.com>

* rename CONTRIBUTION.md to CONTRIBUTING.md TheAlgorithms#836

* remove 'sort alphabetical order' check

* added documentation check

* remove extra paranthesis

* added gitpod

* added gitpod link from README

* attempt to add vscode gitpod extensions

* update gitpod extensions

* add gitpod extensions cmake-tools and git-graph

* remove gitpod init and add commands

* use init to one time install doxygen, graphviz, cpplint

* use gitpod dockerfile

* add ninja build system to docker

* remove configure task

* add github prebuild specs to gitpod

* disable gitpod addcommit

* update documentation for kohonen_som

* added ode solve using forward euler method

* added mid-point euler ode solver

* fixed itegration step equation

* added semi-implicit euler ODE solver

* updating DIRECTORY.md

* fix cpplint issues - lines 117 and 124

* added documentation to ode group

* corrected semi-implicit euler function

* updated docs and test cases better structure

* replace `free` with `delete` operator

* formatting source-code for f55ab50

* updating DIRECTORY.md

* main function must return

* added machine learning group

* added kohonen som topology algorithm

* fix graph image path

* updating DIRECTORY.md

* fix braces

* use snprintf instead of sprintf

* use static_cast

* hardcode character buffer size

* fix machine learning groups in documentation

* fix missing namespace function

* replace kvedala fork references to TheAlgorithms

* fix bug in counting_sort

Co-authored-by: github-actions <${GITHUB_ACTOR}@users.noreply.github.com>
Co-authored-by: Anmol3299 <mittalanmol22@gmail.com>
  • Loading branch information
3 people authored Jun 19, 2020
1 parent 70a2aee commit aaa08b0
Show file tree
Hide file tree
Showing 313 changed files with 49,346 additions and 9,847 deletions.
8 changes: 4 additions & 4 deletions .github/pull_request_template.md
Original file line number Diff line number Diff line change
Expand Up @@ -3,19 +3,19 @@
Thank you for your Pull Request. Please provide a description above and review
the requirements below.
Contributors guide: https://github.com/TheAlgorithms/C-Plus-Plus/CONTRIBUTION.md
Contributors guide: https://github.com/TheAlgorithms/C-Plus-Plus/CONTRIBUTING.md
-->

#### Checklist
<!-- Remove items that do not apply. For completed items, change [ ] to [x]. -->

- [ ] Added description of change
- [ ] Added file name matches [File name guidelines](https://github.com/TheAlgorithms/C-Plus-Plus/blob/master/CONTRIBUTION.md#New-File-Name-guidelines)
- [ ] Added file name matches [File name guidelines](https://github.com/TheAlgorithms/C-Plus-Plus/blob/master/CONTRIBUTING.md#New-File-Name-guidelines)
- [ ] Added tests and example, test must pass
- [ ] Added documentation so that the program is self-explanatory and educational - [Doxygen guidelines](https://www.doxygen.nl/manual/docblocks.html)
- [ ] Relevant documentation/comments is changed or added
- [ ] PR title follows semantic [commit guidelines](https://github.com/TheAlgorithms/C-Plus-Plus/blob/master/CONTRIBUTION.md#Commit-Guidelines)
- [ ] PR title follows semantic [commit guidelines](https://github.com/TheAlgorithms/C-Plus-Plus/blob/master/CONTRIBUTING.md#Commit-Guidelines)
- [ ] Search previous suggestions before making a new one, as yours may be a duplicate.
- [ ] Sort by alphabetical order
- [ ] I acknowledge that all my contributions will be made under the project's license.

Notes: <!-- Please add a one-line description for developers or pull request viewers -->
211 changes: 211 additions & 0 deletions .github/workflows/awesome_forkflow.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,211 @@
name: Awesome CI Workflow

on: [push]
# push:
# branches: [ master ]
# pull_request:
# branches: [ master ]

jobs:
code_format:
name: Code Formatter
runs-on: ubuntu-latest
steps:
- name: requirements
run: |
sudo apt -qq -y update
sudo apt -qq install clang-format
- uses: actions/checkout@master
with:
submodules: true
- name: Setup Git Specs
run: |
git config --global user.name github-actions
git config --global user.email '${GITHUB_ACTOR}@users.noreply.github.com'
git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
- name: Filename Formatter
run: |
IFS=$'\n'
for fname in `find . -type f -name '*.cpp' -o -name '*.cc' -o -name '*.h'`
do
echo "${fname}"
new_fname=`echo ${fname} | tr ' ' '_'`
echo " ${new_fname}"
new_fname=`echo ${new_fname} | tr 'A-Z' 'a-z'`
echo " ${new_fname}"
new_fname=`echo ${new_fname} | tr '-' '_'`
echo " ${new_fname}"
new_fname=${new_fname/.cc/.cpp}
echo " ${new_fname}"
if [ ${fname} != ${new_fname} ]
then
echo " ${fname} --> ${new_fname}"
git "mv" "${fname}" ${new_fname}
fi
done
git commit -am "formatting filenames $GITHUB_SHA" || true
- name: Clang Formatter
run: |
for fname in $(find . -name '*.cpp' -o -name '*.h')
do
clang-format --verbose -i --style="$line1 $line2 $line3 $line4" "$fname"
done
git commit -am "formatting source-code for $GITHUB_SHA" || true
env:
line1: "{ BasedOnStyle: Google, UseTab: Never,"
line2: "IndentWidth: 4, TabWidth: 4, "
line3: "AllowShortIfStatementsOnASingleLine: false, IndentCaseLabels: false,"
line4: "ColumnLimit: 80, AccessModifierOffset: -3 }"
- name: Git Push
run: git push --force origin HEAD:$GITHUB_REF || true

update_directory_md:
name: Update Directory.md
needs: code_format
runs-on: ubuntu-latest
steps:
- uses: actions/checkout@v2
- uses: actions/setup-python@v1
- name: pull latest commit
run: git pull
- name: Update DIRECTORY.md
shell: python
run: |
import os
from typing import Iterator
URL_BASE = "https://github.com/TheAlgorithms/C-Plus-Plus/blob/master"
g_output = []
def good_filepaths(top_dir: str = ".") -> Iterator[str]:
cpp_exts = tuple(".c .c++ .cc .cpp .cu .cuh .cxx .h .h++ .hh .hpp .hxx".split())
for dirpath, dirnames, filenames in os.walk(top_dir):
dirnames[:] = [d for d in dirnames if d[0] not in "._"]
for filename in filenames:
if os.path.splitext(filename)[1].lower() in cpp_exts:
yield os.path.join(dirpath, filename).lstrip("./")
def md_prefix(i):
return f"{i * ' '}*" if i else "\n##"
def print_path(old_path: str, new_path: str) -> str:
global g_output
old_parts = old_path.split(os.sep)
for i, new_part in enumerate(new_path.split(os.sep)):
if i + 1 > len(old_parts) or old_parts[i] != new_part:
if new_part:
g_output.append(f"{md_prefix(i)} {new_part.replace('_', ' ').title()}")
return new_path
def build_directory_md(top_dir: str = ".") -> str:
global g_output
old_path = ""
for filepath in sorted(good_filepaths(), key=str.lower):
filepath, filename = os.path.split(filepath)
if filepath != old_path:
old_path = print_path(old_path, filepath)
indent = (filepath.count(os.sep) + 1) if filepath else 0
url = "/".join((URL_BASE, filepath, filename)).replace(" ", "%20")
filename = os.path.splitext(filename.replace("_", " ").title())[0]
g_output.append(f"{md_prefix(indent)} [{filename}]({url})")
return "# List of all files\n" + "\n".join(g_output)
with open("DIRECTORY.md", "w") as out_file:
out_file.write(build_directory_md(".") + "\n")
- name: Update DIRECTORY.md
run: |
cat DIRECTORY.md
git config --global user.name github-actions
git config --global user.email '${GITHUB_ACTOR}@users.noreply.github.com'
git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
git add DIRECTORY.md
git commit -am "updating DIRECTORY.md" || true
git push --force origin HEAD:$GITHUB_REF || true
# cpplint:
# name: CPPLINT
# needs: code_format
# runs-on: ubuntu-latest
# steps:
# - uses: actions/checkout@master
# - uses: actions/setup-python@master
# - run: pip install cpplint
# - run: git pull
# - run: cpplint --filter=-legal --recursive .

cpplint_modified_files:
runs-on: ubuntu-latest
needs: code_format
name: CPPLINT
steps:
- uses: actions/checkout@master # v2 is broken for git diff
- uses: actions/setup-python@master
- run: python -m pip install cpplint
- run: git remote -v
- run: git branch
- run: git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
- run: git pull
- run: git diff --diff-filter=dr --name-only origin/master > git_diff.txt
- run: echo "Files changed-- `cat git_diff.txt`"
- name: cpplint_modified_files
shell: python
run: |
import os
import subprocess
import sys
print("Python {}.{}.{}".format(*sys.version_info)) # Python 3.8
with open("git_diff.txt") as in_file:
modified_files = sorted(in_file.read().splitlines())
print("{} files were modified.".format(len(modified_files)))
cpp_exts = tuple(".c .c++ .cc .cpp .cu .cuh .cxx .h .h++ .hh .hpp .hxx".split())
cpp_files = [file for file in modified_files if file.lower().endswith(cpp_exts)]
print(f"{len(cpp_files)} C++ files were modified.")
if not cpp_files:
sys.exit(0)
print("cpplint:")
for cpp_file in cpp_files:
subprocess.run(["cpplint", "--filter=-legal/copyright,-build/include", cpp_file], check=True, text=True)
# print("g++:")
# compile_exts = tuple(".c .c++ .cc .cpp .cu .cxx".split())
# compile_files = [file for file in cpp_files if file.lower().endswith(compile_exts)]
# for cpp_file in cpp_files:
# subprocess.run(["g++", cpp_file], check=True, text=True)
upper_files = [file for file in cpp_files if file != file.lower()]
if upper_files:
print(f"{len(upper_files)} files contain uppercase characters:")
print("\n".join(upper_files) + "\n")
space_files = [file for file in cpp_files if " " in file or "-" in file]
if space_files:
print(f"{len(space_files)} files contain space or dash characters:")
print("\n".join(space_files) + "\n")
nodir_files = [file for file in cpp_files if file.count(os.sep) != 1]
if nodir_files:
print(f"{len(nodir_files)} files are not in one and only one directory:")
print("\n".join(nodir_files) + "\n")
bad_files = len(upper_files + space_files + nodir_files)
if bad_files:
sys.exit(bad_files)
build:
name: Compile checks
runs-on: ${{ matrix.os }}
# needs: [cpplint, update_directory_md, cpplint_modified_files]
needs: [update_directory_md]
strategy:
matrix:
os: [ubuntu-latest, windows-latest, macOS-latest]
steps:
- uses: actions/checkout@master
with:
submodules: true
- run: git pull
- run: cmake -B ./build -S .
- run: cmake --build build
13 changes: 0 additions & 13 deletions .github/workflows/cpplint.yml

This file was deleted.

64 changes: 0 additions & 64 deletions .github/workflows/cpplint_modified_files.yml

This file was deleted.

36 changes: 36 additions & 0 deletions .github/workflows/gh-pages.yml
Original file line number Diff line number Diff line change
@@ -0,0 +1,36 @@
name: Doxygen CI

on:
push:
branches: [master]

jobs:
build:
runs-on: macos-latest
steps:
- uses: actions/checkout@master
with:
submodules: true
- name: Install requirements
run: |
brew install graphviz ninja doxygen
- name: configure
run: cmake -G Ninja -B ./build -S .
- name: build
run: cmake --build build -t doc
- name: gh-pages
uses: actions/checkout@master
with:
ref: "gh-pages"
clean: false
- name: Move & Commit files
run: |
git config --global user.name github-actions
git config --global user.email '${GITHUB_ACTOR}@users.noreply.github.com'
git remote set-url origin https://x-access-token:${{ secrets.GITHUB_TOKEN }}@github.com/$GITHUB_REPOSITORY
rm -rf d* && rm *.html && rm *.svg && rm *.map && rm *.md5 && rm *.png && rm *.js && rm *.css
git add .
cp -rp ./build/html/* . && rm -rf ./build && ls -lah
git add .
git commit -m "Documentation for $GITHUB_SHA" || true
git push --force || true
24 changes: 0 additions & 24 deletions .github/workflows/sorting_non_recursive_merge_sort.yml

This file was deleted.

Loading

0 comments on commit aaa08b0

Please sign in to comment.