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GenomeWorks

Clone GenomeWorks

git clone --recursive ssh://git@gitlab-master.nvidia.com:12051/genomics/GenomeWorks.git

Build GenomeWorks

To build GenomeWorks -

mkdir build
cd build
cmake .. -DCMAKE_BUILD_TYPE=Release -DCMAKE_INSTALL_PREFIX=install
make -j install

Enable Unit Tests

To enable unit tests, add -Dgw_enable_tests=ON to the cmake command in the build step.

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SDK for GPU accelerated genome assembly and analysis

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  • C++ 43.1%
  • Cuda 38.3%
  • Python 11.9%
  • CMake 4.4%
  • Shell 2.3%