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Gets the first line of result from ORFFinder and saves it in an output file

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johnnymundi/get_ORFFinder_results

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get_ORFFinder_results

The script gets the first line of result from a given sequence and saves it in an output file containing the sequence tag (or title) + direction and frame

How to use it:

  • Make sure Python and the selenium library are installed;
  • download the chromedriver.exe specific of your machine and save it at C:/Program Files (x86)/;
  • open a terminal and type: python get_ORFFinder_results name_of_the_fasta_file name_of_the_output

Enjoy!

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Gets the first line of result from ORFFinder and saves it in an output file

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