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Description
I am trying to create gene annotations file from GFF following this protocol:
https://github.com/higlass/gene_annotations
Receive an error:
Processing line #: 0
Traceback (most recent call last):
File "scripts/gff_to_jsonl.py", line 116, in <module>
main()
File "scripts/gff_to_jsonl.py", line 84, in main
for p in parts["attributes"].strip(";").split(";")
KeyError: 'attributes'
Could you please help me with this?
In addition, I cannot find file requirements.txt in the gene_annotations repository. Am I to use requirements.txt file from a different higlass repo?
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