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Commits on Jan 8, 2025

• updated yaml header all

  albarema

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  b21503c

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• change yaml header

  albarema

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Commits on Jan 7, 2025

• test output html 05b

  albarema

  committed
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Commits on Dec 20, 2024

• Merge pull request #22 from hds-sandbox/albarema-patch-1

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  albarema

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  2411c7c

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• test yaml output

  albarema

  authored
  9cb790c

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• test code collapse

  albarema

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• test code folding

  albarema

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• test code folding

  albarema

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• Merge pull request #21 from hds-sandbox/albarema-patch-1

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  albarema

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• Update README.md

  albarema

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Commits on Dec 17, 2024

• Updates preprocessing scripts

  albarema

  committed
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Commits on Dec 16, 2024

• typo

  SamueleSoraggi

  committed
  886283c

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• recorrect

  SamueleSoraggi

  committed
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• hopefully corrected notebooks

  SamueleSoraggi

  committed
  03ee5b2

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• webpage trigger token

  SamueleSoraggi

  committed
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• webpage trigger

  SamueleSoraggi

  committed
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Commits on Dec 13, 2024

• removed rstudio api crap

  SamueleSoraggi

  committed
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• dplyr::select instead of select to avoid conflicts in R>4

  SamueleSoraggi

  committed
  eafbcf8

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• updated Data path in notebook

  SamueleSoraggi

  committed
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Commits on Dec 12, 2024

• xmas cleanup

  albarema

  committed
  7d473d2

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Commits on May 16, 2024

• fixed notebook bugs

  

  JSRM

  committed
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Commits on Nov 28, 2023

• feat: updated scripts to vampirium

  joseale2310

  committed
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• feat: first draft vampirium

  joseale2310

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Commits on Oct 17, 2023

• post-debacle fixes

  joseale2310

  committed
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Commits on Jul 14, 2023

• feat: added rsem index and improved preprocessing scripts

  joseale2310

  committed
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Commits on Jul 12, 2023

• Merge branch 'main' of https://github.com/hds-sandbox/bulk_RNAseq_course

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  joseale2310

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• feat: added star and salmon indexes to preprocessing pipelines

  joseale2310

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  a011472

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• Update LICENSE.md

  joseale2310

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  ee7cc96

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• fix: updated gitignore

  joseale2310

  committed
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Commits on Jul 10, 2023

• feat: changed nf-params files to use downloaded fasta and gtf files

  joseale2310

  committed
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• feat: added genome references download script for mouse and human

  joseale2310

  committed
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Commits on Jul 4, 2023

• fix: bulk RNAseq workshop June 2023 hotfixes

  joseale2310

  committed
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Commits on May 22, 2023

• feat: new script to start nf-core rnaseq pipeline

  joseale2310

  committed
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• fix: dplyr commands and some paths

  joseale2310

  committed
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Commits on Apr 14, 2023

• updated notebooks paths

  joseale2310

  committed
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