Minor update to scripts

gremau · Jun 30, 2016 · 5283cdf · 5283cdf
1 parent 40f63cc
commit 5283cdf
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Showing 5 changed files with 21 additions and 18 deletions.
diff --git a/scripts/script_make_ameriflux.m b/scripts/script_make_ameriflux.m
@@ -7,12 +7,12 @@
 %    UNM_sites.SLand, UNM_sites.GLand, UNM_sites.PPine};
 sitelist={UNM_sites.GLand};
 % Years to create files for
-yearlist = 2015;
+yearlist = 2007;
 % Partitioned data source
-partmethod = 'eddyproc'; %'Reddyproc'
+partmethod = 'Reddyproc'; %'eddyproc'
 % Make daily files? All AF files should be in $FLUXROOT$/Ameriflux_files
 make_daily = false;
-write_files = false;
+write_files = true;
 process_soil = false;
 
 for i = 1:length(sitelist);
@@ -30,9 +30,11 @@
                 'process_soil_data', process_soil );
 
         elseif strcmp(partmethod, 'Reddyproc');
-            error( ' not implemented yet ' );
+            %error( ' not implemented yet ' );
             UNM_Ameriflux_File_Maker(sitecode, year,...
-                'write_daily_file', make_daily);
+                'write_daily_file', make_daily, ...
+                'process_soil_data', process_soil, ...
+                'gf_part_source', 'Reddyproc');
 
         end
 

diff --git a/scripts/script_make_fluxall.m b/scripts/script_make_fluxall.m
@@ -7,9 +7,9 @@
 sitelist = {UNM_sites.MCon, UNM_sites.SLand, UNM_sites.JSav, ...
     UNM_sites.GLand, UNM_sites.PPine, UNM_sites.PJ_girdle, UNM_sites.PJ, ...
     UNM_sites.PJ_girdle};
-sitelist = {UNM_sites.JSav};
-yearlist = 2013;%2013:2014;% 2009:2013;
-proc_10hz = false;
+sitelist = {UNM_sites.GLand};
+yearlist = 2016;%2013:2014;% 2009:2013;
+proc_10hz = true;
 count = 1;
 for i = 1:length(sitelist);
     for j = 1:length(yearlist)

diff --git a/scripts/script_make_qc_gf.m b/scripts/script_make_qc_gf.m
@@ -1,12 +1,13 @@
 %close all;
 %clear all;
-sitelist = {UNM_sites.GLand, UNM_sites.SLand, UNM_sites.JSav, UNM_sites.New_GLand,...
-    UNM_sites.PJ, UNM_sites.PJ_girdle, UNM_sites.PPine, UNM_sites.MCon };
-%sitelist = {UNM_sites.MCon};
-yearlist = 2015;
+%sitelist = { UNM_sites.GLand, UNM_sites.SLand, UNM_sites.JSav, UNM_sites.New_GLand,...
+%    UNM_sites.PJ, UNM_sites.PJ_girdle, UNM_sites.PPine, UNM_sites.MCon };
+sitelist = {UNM_sites.MCon};
+yearlist = 2008;
 
-write_qc = false;
-write_gf = false;
+% True, overwrite files; False; do not overwrite
+write_qc = true;
+write_gf = true;
 old_fluxall = false;
 
 for i = 1:length(sitelist);
@@ -31,7 +32,7 @@
             'old_fluxall', old_fluxall);
 
         % Fill in gaps using the REddyProc package
-        % UNM_run_gapfiller(sitecode, year);
+        UNM_run_gapfiller(site, year);
         % 
         % Otherwise, send the resulting for_gapfilling files to
         % the MPI eddyproc web service.

diff --git a/scripts/script_make_soilmet_qc.m b/scripts/script_make_soilmet_qc.m
@@ -4,9 +4,9 @@
 sitelist = {UNM_sites.GLand, UNM_sites.SLand, ...
     UNM_sites.JSav, UNM_sites.PJ, UNM_sites.PPine, ...
     UNM_sites.MCon};
-sitelist = { UNM_sites.PJ_girdle };%, ...
+sitelist = { UNM_sites.PPine };%, ...
     %UNM_sites.SLand};
-yearlist = 2009:2014;%2013:2014;% 2009:2013;
+yearlist = 2015;%2013:2014;% 2009:2013;
 write_qc = true;
 write_rbd = true;
 

diff --git a/scripts/script_process_data_from_disk.m b/scripts/script_process_data_from_disk.m
@@ -1,6 +1,6 @@
 
 
-sitecode = UNM_sites.JSav;
+sitecode = UNM_sites.New_GLand;
 
 cardPath = uigetdir( fullfile( get_site_directory( sitecode ), ...
     'Raw_data_from_cards' ), 'Pick a directory to process.' );