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Merge branch 'rg_1'
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* rg_1:
  Add markdown docs
  Added RNA structure alignments
  • Loading branch information
robjgiff committed May 17, 2024
2 parents 736b2f8 + ae3cf1f commit cc2e2cd
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144 changes: 144 additions & 0 deletions alignments/rna-structure/HCV_ARF_SL/RF00620.afa.txt
Original file line number Diff line number Diff line change
@@ -0,0 +1,144 @@
>AF512996.1/25-177
AGAAAAACCAAACGUAACACCAGCCGUCGCCCACAGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGA
>AB061931.1/25-177
AGAAAAACCAAACGUAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUUGGUGGAGUUUACCUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACUAGGAAGACUUCCGAGCGGUCACAACCUCGU
>D28833.1/213-365
AGACUAACCAAGAGAAACACCUACCGUCGCCCAAUGGACGUCAAGUUCCCGGGCGGCGGU
CAGAUCGUGGGUGGAGUUUACUUGUUACCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCCAGA
>L38350.1/263-415
AGAAAAACCAAACGCAACACCAACCGCCGCCCACAGGACGUUAAAUUCCCGGGUGGGGGG
CAGAUCGUGGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGC
>AY835332.1/49-201
AGACAAACCAAAAGAAACACCAACCGCCGCCCAAUGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUCGGUGGAGUCUACUUAUUGCCGCGCAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACGAGGAAGACCUCCGAACGGUCCCAGCCCAGA
>AY859526.1/320-472
AGAAAAACCAAAAGAAACACCAACCGUCGCCCAAUGGACGUCAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACGAGAAAGACUUCCGAGCGAUCCCAGCCCAGA
>D37850.1/363-515
AGAAAAACCAAAAGAAACACUAACCGUCGCCCUAUGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUCUACUUGUUGCCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGAAAGACCUCAGAACGGUCCCAGCCCAGA
>D38078.1/363-515
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUCGGUGGAGUGUACUUGCUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCA
ACAAGGAAGACUUCAGAACGAUCCCAGCCCAGA
>D84263.2/363-515
AAAAGAAACCAAAGAAACACAAACCGUCGCCCACAGGACGUCAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGUGGAGUCUACUUGCUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCUGAACGGUCCCAGCCCAGA
>AY835218.1/49-201
AGACUAACCAAAAGAAACUCUAACCGUCGCCCACAAGACGUUAAGUAUCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCGGAGCGGUCCCAGCCACGU
>AY622926.1/80-232
AGAAAAACCAGAAGAAACACAAACCGCCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUUUACUUGCUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACA
ACAAGAAAGACUUCCGAGCGAUCCCAGCCGCGU
>AY835219.1/49-201
AGACUAACCAAAAGAAACACUAACCGCCGCCCACAGAACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGACGGAGUAUACUUGUUGCCGCGUAGGGGCCCCCGGUUGGGUGUGCGCGCA
ACGAGGAAAACCUCCGAACGGUCCCAGCCACGU
>L12355.1/338-490
AGAAAAACCAAAAGAAACACCAUCCGUCGCCCACAGGACGUCAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGUGGAGUAUACGUGUUGCCGCGCAGGGGCCCACGAUUGGGUGUGCGCGCG
ACCCGUAAAACUUCUGAAUGGUCACAGCCUCGC
>AY838814.1/38-190
AGAAAAACCAAACGUAACACCAACCGCCGCCCCAUGGACGUCAAGUUCCCGGGUGGUGGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACUCGGAAGACUUCGGAGCGGUCGCAACCUCGU
>AB047639.1/365-517
AGAAAAACCAAAAGAAACACCAACCGUCGCCCAGAAGACGUUAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACG
ACAAGGAAAACUUCGGAGCGGUCCCAGCCACGU
>AB162873.1/209-361
AGACAAACCAAAAGAAACACAAACCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGCGGU
CAAAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAGACUUCGGAACGAUCCCAGCCCAGA
>DQ061301.1/272-424
AGAAAAACCAAACGUAACACCAACCGCCGCCCACAGGACGUUAAGUUCCCGGGUGAUGGU
CAAAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGA
>AY155455.1/37-189
AGACAAACCAAAAGAAACACCAUCCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGA
CAGAUCGUUGGUGGAGUAUACGUGUUGCCGCGCAGGGGCCCGCGAUUGGGUGUGCGCGCG
ACGCGUAAAACUUCCGAGCGGUCGCAGCCUCGC
>D14669.1/49-201
AGAAAAACCAAAAGAAACACCAACCGUCGGCCACAAGACGUUAAGUUUCCGGGCGGCGGU
CAGAUCGUUGGCGGAGUAUACUUGCUACCGCGCAGGGGCCCCAGGUUGGGUGUGCGUGCG
ACUAGGAAGACUUCCGAGCGGUCCCAACCUCGU
>D84265.2/363-515
AGAAAAACCAAAAGAAACACUAACCGUCGCCCUAUGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCUAGA
>AY051292.1/366-518
AGAAAAACCAAACGUAACACCAACCGACGCCCACAGAACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUUUGCUUGUUGCCGCGCAGGGGUCCCAGAGUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCACAACCUCGC
>L48498.1/263-415
AGACAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGGGUGUACUUGUUGCCGCGCAGGGGCCCCAGAGUGGGUGUGCGCGCG
ACGAGAAAGACCUCGGAGCGGUCCCAGCCGCGU
>U94724.1/331-483
AGAAAAACCAAACGUAACACCAACCGCCGCCCAAUGGACGUUAAGUUCCCGGGUGGCAGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGUAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACUAGGAAGACUUCGGAGCGGUCGCAACCUCGU
>D88474.1/363-515
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGUGGUGGU
CAGAUCGUCGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAAACUUCUGAACGGUCCCAGCCUAGG
>L38319.1/263-415
AGAAAAACCAAAAGAAACACUAACCGCCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGAGUAUACUUGCUGCCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGGAAAACCUCCGAACGGUCCCAGCCACGU
>AY155449.1/37-189
AGACAAACCAAAAGAAACACACCCCGUCGCCCACAGAACGUUAAGUUCCCGGGCGGCGGG
CAGAUCGUUGGUGGAGUAUACGUAUUGCCGCGCAGGGGCCCACGGUUGGGUGUGCGCGCA
GUGCGUAAGACUUCCGAGCGGUCGCAACCUCGC
>Y13184.1/304-456
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUAAAUUGGGUGUGCGCGCG
ACUCGGAAGAAUUCGGAACGGUCGCAACCCCGU
>AY070167.1/229-381
AGAAAAACCAAAAGAAACACAAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACG
ACGAGGAAGACUUCCGAACGGUCCCAGCCACGU
>AY434111.1/271-423
AGAAAAACCAAAAGAAACACUAACCGUCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGUGGAGUAUACCUGUUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACUAGGAAGACUUCCGAACGGUCCCAGCCCAGA
>AB162863.1/209-361
AGAAUAACCAAAAGAAACAUAUGCCGUCGCCCACAAGACGUUAAGUUUCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGGCUUCGGAGCGGUCCCAGCCACGU
>AY835205.1/49-201
AGAAAAACCAAAAGAAAUACUAACCGUCGCCCACAAGACGUUAAGUUUCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUACCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCGGAGCGGUCCCAGCCACGU
>X76411.1/53-205
AGAAAAACCAAAAGAAACACUAACCGCCGCCCACAGGACAUUAAGUUCCCGGGCGGCGGC
CAGAUCGUCGGCGGAGUGUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAAACUUCCGAACGGUCCCAGCCACGU
>AB162870.1/209-361
AGAAAAACCAAAAGAAACACCAACCGUCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACGAGAAAGACUUCUGAACGGUCCCAGCCCAGA
>AY232732.1/329-481
AGAAAAACCAAAAGAAACACAAACCGCCGCCCACAGGACGUCAAGUUCCCGGGUGGUGGU
CAGAUCGUUGGCGGAGUUUACUUGCUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCUGAGCGAUCCCAGCCGCGU
>D49756.1/367-519
AGAAUAACCAAAAGAAACACCAACCGUCGCCCACAGGACGUUAAGUUUCCGGGUGGCGGU
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCGCGU
>L38333.1/263-415
AGAAAAACUAAAAGAAACACUAACCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
CCAAGGAAGACUUCUGAACGGUCCCAGCCACGU
144 changes: 144 additions & 0 deletions alignments/rna-structure/HCV_ARF_SL/RF00620.fasta.txt
Original file line number Diff line number Diff line change
@@ -0,0 +1,144 @@
>AF512996.1/25-177
AGAAAAACCAAACGUAACACCAGCCGUCGCCCACAGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGA
>AB061931.1/25-177
AGAAAAACCAAACGUAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUUGGUGGAGUUUACCUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACUAGGAAGACUUCCGAGCGGUCACAACCUCGU
>D28833.1/213-365
AGACUAACCAAGAGAAACACCUACCGUCGCCCAAUGGACGUCAAGUUCCCGGGCGGCGGU
CAGAUCGUGGGUGGAGUUUACUUGUUACCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCCAGA
>L38350.1/263-415
AGAAAAACCAAACGCAACACCAACCGCCGCCCACAGGACGUUAAAUUCCCGGGUGGGGGG
CAGAUCGUGGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGC
>AY835332.1/49-201
AGACAAACCAAAAGAAACACCAACCGCCGCCCAAUGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUCGGUGGAGUCUACUUAUUGCCGCGCAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACGAGGAAGACCUCCGAACGGUCCCAGCCCAGA
>AY859526.1/320-472
AGAAAAACCAAAAGAAACACCAACCGUCGCCCAAUGGACGUCAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACGAGAAAGACUUCCGAGCGAUCCCAGCCCAGA
>D37850.1/363-515
AGAAAAACCAAAAGAAACACUAACCGUCGCCCUAUGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUCUACUUGUUGCCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGAAAGACCUCAGAACGGUCCCAGCCCAGA
>D38078.1/363-515
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUCGGUGGAGUGUACUUGCUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCA
ACAAGGAAGACUUCAGAACGAUCCCAGCCCAGA
>D84263.2/363-515
AAAAGAAACCAAAGAAACACAAACCGUCGCCCACAGGACGUCAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGUGGAGUCUACUUGCUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCUGAACGGUCCCAGCCCAGA
>AY835218.1/49-201
AGACUAACCAAAAGAAACUCUAACCGUCGCCCACAAGACGUUAAGUAUCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCGGAGCGGUCCCAGCCACGU
>AY622926.1/80-232
AGAAAAACCAGAAGAAACACAAACCGCCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUUUACUUGCUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACA
ACAAGAAAGACUUCCGAGCGAUCCCAGCCGCGU
>AY835219.1/49-201
AGACUAACCAAAAGAAACACUAACCGCCGCCCACAGAACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGACGGAGUAUACUUGUUGCCGCGUAGGGGCCCCCGGUUGGGUGUGCGCGCA
ACGAGGAAAACCUCCGAACGGUCCCAGCCACGU
>L12355.1/338-490
AGAAAAACCAAAAGAAACACCAUCCGUCGCCCACAGGACGUCAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGUGGAGUAUACGUGUUGCCGCGCAGGGGCCCACGAUUGGGUGUGCGCGCG
ACCCGUAAAACUUCUGAAUGGUCACAGCCUCGC
>AY838814.1/38-190
AGAAAAACCAAACGUAACACCAACCGCCGCCCCAUGGACGUCAAGUUCCCGGGUGGUGGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACUCGGAAGACUUCGGAGCGGUCGCAACCUCGU
>AB047639.1/365-517
AGAAAAACCAAAAGAAACACCAACCGUCGCCCAGAAGACGUUAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACG
ACAAGGAAAACUUCGGAGCGGUCCCAGCCACGU
>AB162873.1/209-361
AGACAAACCAAAAGAAACACAAACCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGCGGU
CAAAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAGACUUCGGAACGAUCCCAGCCCAGA
>DQ061301.1/272-424
AGAAAAACCAAACGUAACACCAACCGCCGCCCACAGGACGUUAAGUUCCCGGGUGAUGGU
CAAAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCGCAACCUCGA
>AY155455.1/37-189
AGACAAACCAAAAGAAACACCAUCCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGA
CAGAUCGUUGGUGGAGUAUACGUGUUGCCGCGCAGGGGCCCGCGAUUGGGUGUGCGCGCG
ACGCGUAAAACUUCCGAGCGGUCGCAGCCUCGC
>D14669.1/49-201
AGAAAAACCAAAAGAAACACCAACCGUCGGCCACAAGACGUUAAGUUUCCGGGCGGCGGU
CAGAUCGUUGGCGGAGUAUACUUGCUACCGCGCAGGGGCCCCAGGUUGGGUGUGCGUGCG
ACUAGGAAGACUUCCGAGCGGUCCCAACCUCGU
>D84265.2/363-515
AGAAAAACCAAAAGAAACACUAACCGUCGCCCUAUGGACGUCAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCUAGA
>AY051292.1/366-518
AGAAAAACCAAACGUAACACCAACCGACGCCCACAGAACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUUUGCUUGUUGCCGCGCAGGGGUCCCAGAGUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAGCGGUCACAACCUCGC
>L48498.1/263-415
AGACAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGGGUGUACUUGUUGCCGCGCAGGGGCCCCAGAGUGGGUGUGCGCGCG
ACGAGAAAGACCUCGGAGCGGUCCCAGCCGCGU
>U94724.1/331-483
AGAAAAACCAAACGUAACACCAACCGCCGCCCAAUGGACGUUAAGUUCCCGGGUGGCAGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGUAGGGGCCCUAGAUUGGGUGUGCGCGCG
ACUAGGAAGACUUCGGAGCGGUCGCAACCUCGU
>D88474.1/363-515
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGUGGUGGU
CAGAUCGUCGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGUUUGGGUGUGCGCGCG
ACGAGGAAAACUUCUGAACGGUCCCAGCCUAGG
>L38319.1/263-415
AGAAAAACCAAAAGAAACACUAACCGCCGCCCACAGGACGUUAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGAGUAUACUUGCUGCCGCGCAGGGGCCCGAGAUUGGGUGUGCGCGCG
ACGAGGAAAACCUCCGAACGGUCCCAGCCACGU
>AY155449.1/37-189
AGACAAACCAAAAGAAACACACCCCGUCGCCCACAGAACGUUAAGUUCCCGGGCGGCGGG
CAGAUCGUUGGUGGAGUAUACGUAUUGCCGCGCAGGGGCCCACGGUUGGGUGUGCGCGCA
GUGCGUAAGACUUCCGAGCGGUCGCAACCUCGC
>Y13184.1/304-456
AGAAAAACCAAAAGAAACACCAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGU
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUAAAUUGGGUGUGCGCGCG
ACUCGGAAGAAUUCGGAACGGUCGCAACCCCGU
>AY070167.1/229-381
AGAAAAACCAAAAGAAACACAAACCGCCGCCCACAGGACGUCAAGUUCCCGGGCGGUGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCACG
ACGAGGAAGACUUCCGAACGGUCCCAGCCACGU
>AY434111.1/271-423
AGAAAAACCAAAAGAAACACUAACCGUCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGC
CAGAUCGUUGGUGGAGUAUACCUGUUGCCGCGCAGGGGCCCCCGGUUGGGUGUGCGCGCG
ACUAGGAAGACUUCCGAACGGUCCCAGCCCAGA
>AB162863.1/209-361
AGAAUAACCAAAAGAAACAUAUGCCGUCGCCCACAAGACGUUAAGUUUCCGGGUGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGGCUUCGGAGCGGUCCCAGCCACGU
>AY835205.1/49-201
AGAAAAACCAAAAGAAAUACUAACCGUCGCCCACAAGACGUUAAGUUUCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUAUACUUGUUACCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCGGAGCGGUCCCAGCCACGU
>X76411.1/53-205
AGAAAAACCAAAAGAAACACUAACCGCCGCCCACAGGACAUUAAGUUCCCGGGCGGCGGC
CAGAUCGUCGGCGGAGUGUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAAACUUCCGAACGGUCCCAGCCACGU
>AB162870.1/209-361
AGAAAAACCAAAAGAAACACCAACCGUCGCCCACAGGACGUUAAGUUCCCGGGUGGCGGU
CAGAUCGUUGGUGGAGUUUACUUGUUGCCGCGCAGGGGCCCUCGGUUGGGUGUGCGCGCG
ACGAGAAAGACUUCUGAACGGUCCCAGCCCAGA
>AY232732.1/329-481
AGAAAAACCAAAAGAAACACAAACCGCCGCCCACAGGACGUCAAGUUCCCGGGUGGUGGU
CAGAUCGUUGGCGGAGUUUACUUGCUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACAAGGAAGACUUCUGAGCGAUCCCAGCCGCGU
>D49756.1/367-519
AGAAUAACCAAAAGAAACACCAACCGUCGCCCACAGGACGUUAAGUUUCCGGGUGGCGGU
CAGAUCGUUGGCGGAGUAUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
ACGAGGAAGACUUCCGAACGGUCCCAGCCGCGU
>L38333.1/263-415
AGAAAAACUAAAAGAAACACUAACCGUCGCCCACAGGACGUUAAGUUCCCGGGCGGCGGC
CAGAUCGUUGGCGGAGUUUACUUGUUGCCGCGCAGGGGCCCCAGGUUGGGUGUGCGCGCG
CCAAGGAAGACUUCUGAACGGUCCCAGCCACGU
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