Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Ensure correct ordering of acquisition in multiplexing converter #819

Open
jluethi opened this issue Aug 21, 2024 · 0 comments
Open

Ensure correct ordering of acquisition in multiplexing converter #819

jluethi opened this issue Aug 21, 2024 · 0 comments
Assignees

Comments

@jluethi
Copy link
Collaborator

jluethi commented Aug 21, 2024

Spotted by Serguei Ovinnikov:

There appears to be a slight bug in the Ome to Zarr Multiplexing converter v1.3.0. It somehow uses some internal indexing based on sorting that mixes up the order. Example: I have 20 acquisitions with names 0,1,2,3,4,5,6,7,8,9,10,11 etc. When I use the converter the order of cycles is 0,1,10,11,12,13,14,15 etc in my zarr file. If I use the 1.2,1 version its works fine.

Let's fix this by going back to ordering after casting to int (as the spec requires acquisitions to be integers anyway).

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
Development

No branches or pull requests

1 participant