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egenesis

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  1. WF-NF-rnaseq-deprecated WF-NF-rnaseq-deprecated Public archive

    Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

    Nextflow

  2. WF-NF-scrnaseq WF-NF-scrnaseq Public

    Forked from nf-core/scrnaseq

    A single-cell RNAseq pipeline for 10X genomics data

    Nextflow

  3. WF-NF-rnassembly WF-NF-rnassembly Public

    nf-core pipeline for RNA assembly analysis

    Nextflow

  4. WF-NF-ATACseq WF-NF-ATACseq Public

    Forked from nf-core/atacseq

    ATAC-seq peak-calling, QC and differential analysis pipeline

    Nextflow

  5. WF-NF-hic WF-NF-hic Public

    Forked from nf-core/hic

    Analysis of Chromosome Conformation Capture data (Hi-C)

    Python

  6. vgp-assembly vgp-assembly Public

    Forked from VGP/vgp-assembly

    VGP repository for the genome assembly working group

    Shell

Repositories

Showing 10 of 10 repositories
  • seven_bridges_apps Public

    Applications for Seven Bridges

    egenesis/seven_bridges_apps’s past year of commit activity
    Shell 0 1 0 0 Updated Apr 5, 2024
  • Xenokidney-Physiology-Nature-Communications Public

    RNAseq processing and analysis code used in R.

    egenesis/Xenokidney-Physiology-Nature-Communications’s past year of commit activity
    0 0 0 0 Updated Apr 24, 2023
  • pipe4C Public Forked from deLaatLab/pipe4C

    4C-seq processing pipeline

    egenesis/pipe4C’s past year of commit activity
    R 0 17 0 0 Updated Nov 17, 2021
  • WF-NF-ATACseq Public Forked from nf-core/atacseq

    ATAC-seq peak-calling, QC and differential analysis pipeline

    egenesis/WF-NF-ATACseq’s past year of commit activity
    Nextflow 0 MIT 123 0 0 Updated Apr 23, 2021
  • WF-NF-scrnaseq Public Forked from nf-core/scrnaseq

    A single-cell RNAseq pipeline for 10X genomics data

    egenesis/WF-NF-scrnaseq’s past year of commit activity
    Nextflow 0 MIT 179 0 0 Updated Dec 7, 2020
  • WF-NF-rnaseq-deprecated Public archive Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR or HISAT2, with gene counts and quality control

    egenesis/WF-NF-rnaseq-deprecated’s past year of commit activity
    Nextflow 0 MIT 717 0 0 Updated Jun 4, 2020
  • vgp-assembly Public Forked from VGP/vgp-assembly

    VGP repository for the genome assembly working group

    egenesis/vgp-assembly’s past year of commit activity
    Shell 0 51 0 0 Updated Apr 22, 2020
  • genename Public Forked from yinshiyi/genename
    egenesis/genename’s past year of commit activity
    R 0 1 0 0 Updated Apr 21, 2020
  • WF-NF-hic Public Forked from nf-core/hic

    Analysis of Chromosome Conformation Capture data (Hi-C)

    egenesis/WF-NF-hic’s past year of commit activity
    Python 0 MIT 56 0 0 Updated Apr 2, 2020
  • WF-NF-rnassembly Public

    nf-core pipeline for RNA assembly analysis

    egenesis/WF-NF-rnassembly’s past year of commit activity
    Nextflow 0 MIT 0 0 0 Updated Nov 14, 2019

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