Dozmorov Lab
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excluderanges
excluderanges PublicGenomic coordinates of problematic genomic regions as GRanges
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HiCcompare
HiCcompare PublicJoint normalization of two Hi-C matrices, visualization and detection of differential chromatin interactions. See multiHiCcompare for the analysis of multiple Hi-C matrices
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multiHiCcompare
multiHiCcompare PublicJoint normalization of multiple Hi-C matrices, visualization and detection of differential chromatin interactions, supporting covariates.
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preciseTAD
preciseTAD PublicpreciseTAD: A machine learning framework for precise 3D boundary prediction at base-level resolution
R 7
Repositories
- scHiCcompare Public
Differential analysis of scHi-C data. Includes imputation and normalization steps
- deep-learning-with-R-2nd-edition-code Public Forked from t-kalinowski/deep-learning-with-R-2nd-edition-code
Code from the book "Deep Learning with R, 2nd Edition"