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Commits on Apr 7, 2023

• Merge branch 'deepmind:main' into main

  dialvarezs

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Commits on Mar 27, 2023

• Upgrade pyopenssl in colab.

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  Htomlinson14

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• Change softmax to use where and float32.

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  Htomlinson14

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Commits on Mar 20, 2023

• Re-enable form cellview.

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  Htomlinson14

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Commits on Mar 15, 2023

• Improvements + fix on docker image

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  dialvarezs

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Commits on Mar 10, 2023

• Bump Python in Colab to 3.9.

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  Augustin-Zidek

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Commits on Mar 6, 2023

• Turn off bfloat16 in colab.

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  Htomlinson14

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Commits on Feb 24, 2023

• Fix incorrect type annotations.

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  Augustin-Zidek

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Commits on Feb 21, 2023

• Improve readme explanation of ranked_*.pdb.

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  Htomlinson14

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Commits on Feb 9, 2023

• Add cell execution order error checking.

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  Htomlinson14

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  502d7a1

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Commits on Feb 1, 2023

• Make _chem_comp.type logic case-insensitive.

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  Augustin-Zidek

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Commits on Jan 27, 2023

• Update readme for relaxation flag.

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  Htomlinson14

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• Improve documentation on how to install aria2c.

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  Augustin-Zidek

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Commits on Jan 23, 2023

• Update tensorflow

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  Htomlinson14

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Commits on Jan 17, 2023

• Remove jax dependency from results pkl

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  Htomlinson14

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Commits on Jan 13, 2023

• Add ability to only run relax for the best unrelaxed model.

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  Htomlinson14

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Commits on Jan 12, 2023

• Use shutil to zip and download colab outputs

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  Htomlinson14

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  0d9a24b

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• Merge branch 'deepmind:main' into main

  dialvarezs

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  8bb51c5

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• Fix typo in a comment in residue constants.

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  Augustin-Zidek

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Commits on Jan 11, 2023

• Bump version to 2.3.1

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  Htomlinson14

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• Update of README.md

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  DeepMind

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Commits on Jan 10, 2023

• Fix GPU relax for longer chains by pinning large memory ops to cpu.

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  alexanderimanicowenrivers

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Commits on Dec 23, 2022

• Adding recycle information for timings.

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  alexanderimanicowenrivers

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Commits on Dec 21, 2022

• Adding prediction timings to README.

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  alexanderimanicowenrivers

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• Add eval_dropout option for using dropout in trunk at eval time.

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  joshabramson

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Commits on Dec 20, 2022

• Speed up Colab multimer MSA search: fetch each db chunk only once and run all queries against it.

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  Augustin-Zidek

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Commits on Dec 19, 2022

• [NumPy] Remove references to deprecated NumPy type aliases.

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  hawkinsp

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Commits on Dec 15, 2022

• Restore the max sequence limit to 4000 now that unified memory is fixed.

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  andycowie

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• Add query_multiple to Jackhmmer.

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  Augustin-Zidek

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• [NumPy] Remove references to deprecated NumPy type aliases.

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  hawkinsp

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Commits on Dec 13, 2022

• Set environment variables before any other code is executed.

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  andycowie

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  a0b0cd9

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• Update run_alphafold_singularity.py for v2.3.0

  dialvarezs

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  a0c15e5

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• Merge remote-tracking branch 'upstream/main'

  dialvarezs

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Commits on Dec 11, 2022

• Update readme.

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  Augustin-Zidek

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• Release code for v2.3.0

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  Augustin-Zidek

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