mGEMS Genomic epidemiology with mixed samples

Logan Unitigs and Contigs

A Comprehensive Toolkit for High-Quality PDF Content Extraction

Python code for easy Gantt chart generation

A programming framework for agentic AI 🤖

Functional Analysis of Metagenomes by Likelihood Inference

An index of algorithms for learning causality with data

The open source repository for the Causal Modeling in Machine Learning Workshop at Altdeep.ai @ www.altdeep.ai/courses/causalML

Alignment algorithm for short Illumina reads to a de Bruijn graph

MMseqs2: ultra fast and sensitive search and clustering suite

Machine Learning and Artificial Intelligence for Medicine.

GTDB-Tk: a toolkit for assigning objective taxonomic classifications to bacterial and archaeal genomes.

Bioinformatics program inStrain